DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9297 and ehd3

DIOPT Version :10

Sequence 1:NP_788674.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:XP_068071610.1 Gene:ehd3 / 562949 ZFINID:ZDB-GENE-041014-352 Length:551 Species:Danio rerio


Alignment Length:425 Identity:113/425 - (26%)
Similarity:207/425 - (48%) Gaps:54/425 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 REKATDNVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSKPLILFMGPWSGGKSSI 588
            |.|....|.:.:...:|::|:..:.|||..||:.:..:....|.:..:||::|.:|.:|.||:|.
Zfish    10 RRKKDPEVFQTVSEGLKKLYKTKLLPLEEHYKFHEFHSPALEDADFDNKPMVLLVGQYSTGKTSF 74

  Fly   589 LNYLTDNEYTPNSLRTGAEPSPAYFNILMWGNETEVLDGTQLAAD--YTFAGLQKFGQGLEERLR 651
            :.||.:.::.  .:|.|.||:...|..:|.|....::.|..|..|  ..|..|..||.....|..
Zfish    75 IRYLLEQDFP--GMRIGPEPTTDSFIAVMHGTMEGLIPGNALVVDPKKPFRKLNAFGNAFLNRFV 137

  Fly   652 GLKMKSKILEKVNIVEIPGILEVRKQ-VSRV----------------FPFNDACQWFIDRADIIF 699
            ..::.:.:||.:::::.||||...|| :|||                :.|....:||.:|.|.|.
Zfish   138 CAQLPNPVLESISVIDTPGILSGEKQRISRVATEDGYSCLRKCPYGGYDFAAVLEWFAERVDRII 202

  Fly   700 LVYDPAKLDVGPETEAILDQLKGREYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPL 764
            |::|..|||:..|...::..||..|.:.|::|||||.::.::|:||.|||:|::..::::.:...
Zfish   203 LLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLGKIVNTPEVIR 267

  Fly   765 MYTTSLWTHPYQDGAPARLLLAQERAFLRDL----RTAIDKRIEHKIASARRFAVRVRNHAKMVD 825
            :|..|.|:||.......:|..|:|:...:|:    |.|..:::...|..||...|    ||.::.
Zfish   268 VYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKV----HAYIIS 328

  Fly   826 CYLNTFNNHKTLFG--NKKRIADDIIDHPQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNPLY 888
               :......::||  |||:   ::|:  ....||..:.....||..|.|:.:..::..:.:.|.
Zfish   329 ---SLKKEMPSVFGKDNKKK---ELIN--SLGEIYSRIEREHQISPGDFPNLKKMQEQLQAHDLN 385

  Fly   889 EFK----KLRDTCTYFRGCPITKLDLAIAYELPEL 919
            :|:    ||.||           :|..:|:::.:|
Zfish   386 KFQPLKMKLLDT-----------VDDMLAHDIAQL 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_788674.1 MSCRAMM_ClfA <93..367 CDD:468110
TSP3 repeat_long 167..205 CDD:275366
EHD_N 539..570 CDD:465295 8/30 (27%)
EHD 574..813 CDD:206740 76/261 (29%)
ehd3XP_068071610.1 EHD_N <37..56 CDD:465295 4/18 (22%)
EHD 60..316 CDD:206740 74/257 (29%)
DUF5600 304..410 CDD:465667 28/129 (22%)
EH 454..547 CDD:197477
Blue background indicates that the domain is not in the aligned region.

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