DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9297 and srl

DIOPT Version :10

Sequence 1:NP_788674.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:XP_012826700.2 Gene:srl / 493203 XenbaseID:XB-GENE-981745 Length:999 Species:Xenopus tropicalis


Alignment Length:994 Identity:303/994 - (30%)
Similarity:489/994 - (49%) Gaps:167/994 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GSGELQSDQPRGDDDDDDDDGGHSAVD---EKDTIEIETVELDST----------EDAK---SAN 102
            |..|||..:|.|.||....:...::||   :...:..|.:.::||          :|||   ::.
 Frog    18 GGAELQVSKPDGSDDAAFVESKAASVDPSLDDQMLYAEQMPVESTLLLPITHGSDDDAKHDCTSE 82

  Fly   103 DLDGDGIP-DDEDDDIDGDGIP--------------NEKDDDIDGDGIPNDEDDDIDGDGIPNED 152
            .::...:| :.::.|.....:|              :.|.||.|| .:..:|..:::...:..:|
 Frog    83 SVEKIKVPAEGQEQDNASQRVPFCEPVTSMGFKEKEDSKTDDKDG-ALKVEEQVNLENPPLEEKD 146

  Fly   153 ---DDDIDGDGVPNSKDEDIDGDGVPNSKDEDIDGDGKANHEDDDLDGDGTPNHEDEDLDGDGVP 214
               :||::|....|.|......|....|:....:|:.|         .|.|.:..|..|..|..|
 Frog   147 ITLEDDLEGAHNENQKYHSGQTDDTAQSEHFKSNGEEK---------NDSTKSVTDTILVEDESP 202

  Fly   215 NEEDDDLDGDGKINH---EDEDLDGDGVKNDEDEDLDGDGKVNHEDE---DLDGDGVKNEKDDDL 273
            :..|..:       |   |||.::..|.:...:.||      |:|.:   ::....:.:...|.|
 Frog   203 STTDISI-------HQVSEDEVVNSGGEQTVSENDL------NYEQDHPSEVKDPSMSDSNTDIL 254

  Fly   274 DGDGTNNSQDE---DLDGDGVPNEKDDD---LDGDGILNEHDGDVDGDGVPNEHDHKDSGENA-D 331
            :|:..::..:|   :...||...|..::   .:..|||.|...:|      .|.|..|.|..| |
 Frog   255 NGNSFDSGNEELVLETVNDGPEEEMVNEQYHKENKGILEEEANNV------KELDSDDQGFQAKD 313

  Fly   332 DDDDDDDEDDKEAVKKRSK-REVDAAP-----VLDIEAPPSPAEEFPV-----EEEIVKEASAE- 384
            :...::|.::.:.|:...| ||||.:.     ||:: .|.:..:...|     .|::|.::|.. 
 Frog   314 NGSSEEDVNEGQKVQSEDKLREVDVSVEEKDIVLNV-TPENNNDGIDVLSVEENEKVVPDSSNNL 377

  Fly   385 ------EEAEVEAVKEEEPEQEAVQEP--EPEPVVEPEAEVQPEPVQQEEEKAESAEAKEEEKPA 441
                  |.:|::.....:||.....:|  :||..|:.:...|||.....:..::.....:.:.|:
 Frog   378 NKGNVIETSELDNDPPSQPETTVDNDPPSQPETTVDNDPPSQPETTVDNDPPSQPETTVDNDPPS 442

  Fly   442 PVEEAEAEEESVQPEAA-----PKEPEAVQEEAQEDEPQTDGAQDAADDDDDTKP---------- 491
            ..|.....:...|||..     |.:||...:.....:|:|     ..|:|..::|          
 Frog   443 QPETTVDNDPPSQPETTVDNDPPSQPETTVDNDPPSQPET-----TVDNDPPSQPENTILNSHDQ 502

  Fly   492 ----EDELLWEGHIPENR--------------------------RSRQHITELLQLDEEFNAREK 526
                |||..:||...|:.                          |.|.||...|:|.|     :|
 Frog   503 ENSKEDETFYEGEPTESPLTQKNTDNPRLQFQKDDVEDVEDVTIRDRSHIDSTLKLTE-----DK 562

  Fly   527 ATDNVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFS------------DPEIFSKPLILFMG 579
            ..|:.:..:.| :::||.:|::|||..|||.:|.....:            |.||.|||::||:|
 Frog   563 PKDDYSAALQR-LRKIYHSAIRPLELSYKYNELRQHEITAYQGRTLADSAPDGEITSKPMVLFLG 626

  Fly   580 PWSGGKSSILNYLTDNEYTPNSLRTGAEPSPAYFNILMWGNETEVLDGTQLAAD--YTFAGLQKF 642
            |||.|||:::|||...:.||..|.|||||:.:.|.:||.|.:.:.::|..:|||  .:|:.|:||
 Frog   627 PWSVGKSTMINYLLGLDDTPYQLYTGAEPTTSEFTVLMHGPKMKTIEGIVMAADSSRSFSPLEKF 691

  Fly   643 GQGLEERLRGLKMKSKILEKVNIVEIPGILEVRKQVSRVFPFNDACQWFIDRADIIFLVYDPAKL 707
            ||...|:|.|:::..|:||:|:.|:.|||:|.|||..|.:|||:.|||||||||:||:|:||.||
 Frog   692 GQNFLEKLIGIEIPHKLLERVSFVDTPGIIENRKQQERGYPFNEVCQWFIDRADLIFVVFDPTKL 756

  Fly   708 DVGPETEAILDQLKGREYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPLMYTTSLWT 772
            |||.|.|.:..||||||.|.||||||||::..:||:||.|||.|:::||::..:||.:|.:|.|.
 Frog   757 DVGLELEMLFRQLKGRESQIRIILNKADSLATQELMRVYGALFWSLAPLINVTEPPRVYVSSFWA 821

  Fly   773 HPYQDGAPARLLLAQERAFLRDLRTAIDKRIEHKIASARRFAVRVRNHAKMVDCYLNTFNNHKTL 837
            ..|.......|.|.:|.:.|.||...|:.|:|:|||..|:.|:|||.||.:||.||:|:.:..|.
 Frog   822 DDYHAETHRELFLKEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLVDRYLHTYKDKMTF 886

  Fly   838 FGNKKRIADDIIDHPQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNPLYEFKKLRDTCTYFRG 902
            |.:.:.:..||::.|..|.|::.:...||:|::|||:.|.|:|||.:||:..||.|...|:|..|
 Frog   887 FSDGELVFKDIVEDPDKYFIFKSILAKTNVSKFDLPNKEAYKDFFGVNPISSFKLLSQQCSYMGG 951

  Fly   903 CPITKLDLAIAYELPELAG 921
            |.:.|::.||.:|||:|.|
 Frog   952 CLLEKIEKAITHELPDLLG 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_788674.1 MSCRAMM_ClfA <93..367 CDD:468110 68/323 (21%)
TSP3 repeat_long 167..205 CDD:275366 6/37 (16%)
EHD_N 539..570 CDD:465295 12/42 (29%)
EHD 574..813 CDD:206740 118/240 (49%)
srlXP_012826700.2 MSCRAMM_ClfA <168..519 CDD:468110 81/384 (21%)
EHD_N 573..600 CDD:465295 11/27 (41%)
EHD 621..862 CDD:206740 118/240 (49%)

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