DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9297 and ehd1b

DIOPT Version :9

Sequence 1:NP_001262553.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001004578.1 Gene:ehd1b / 447839 ZFINID:ZDB-GENE-030131-2069 Length:532 Species:Danio rerio


Alignment Length:434 Identity:112/434 - (25%)
Similarity:205/434 - (47%) Gaps:41/434 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   525 EKATDNVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSKPLILFMGPWSGGKSSIL 589
            :|....:.:.:...:||:|...:.|||..|::.|..:....|.:..:||::|.:|.:|.||::.:
Zfish    10 KKKDPELFQTVSDGLKRLYRTKLFPLEDAYRFHDFHSPALEDADFDNKPMVLLVGQYSTGKTTFI 74

  Fly   590 NYLTDNEYTPNSLRTGAEPSPAYFNILMWGNETEVLDGTQLAAD--YTFAGLQKFGQGLEERLRG 652
            .:|.:.::.  .:|.|.||:...|..:|.|.:..::.|..|..|  ..|..|..||.....|...
Zfish    75 RHLMEQDFP--GMRIGPEPTTDSFIAVMHGEQEGLIPGNALVVDPKKPFRKLNAFGNAFLNRFIC 137

  Fly   653 LKMKSKILEKVNIVEIPGILEVRKQ-VSRVFPFNDACQWFIDRADIIFLVYDPAKLDVGPETEAI 716
            .:|.:.:|:.::|::.||||...|| :||.:.|....:||.:|.|.|.|::|..|||:..|...:
Zfish   138 AQMPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEV 202

  Fly   717 LDQLKGREYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPLMYTTSLWTHPYQDGAPA 781
            :..||..|.:.|::|||||.:..::|:||.|||:|::..::::.:...:|..|.|..|.......
Zfish   203 IRALKNHEDKMRVVLNKADQIGTQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWAQPLLVADNR 267

  Fly   782 RLLLAQERAFLRDL----RTAIDKRIEHKIASARRFAVRVRNHAKMVDCYLNTF---NNHKTLFG 839
            :|..|:|:...||:    |.|..:::...|..||...|:....:.:.....|.|   |..|.|..
Zfish   268 KLFEAEEQDLFRDIQGLPRNAALRKLNDLIKRARLAKVQAYIISSLKKEMPNVFGKENKKKELIA 332

  Fly   840 NKKRIADDIIDHPQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNPLYEFKKLRDTCTYFRGCP 904
            |...|...|   .:.:.|..|                   ||.:|:.:.|....:| .|.|:|..
Zfish   333 NLGEIYAKI---EKEHQISPG-------------------DFPKLSKMQEVLAGQD-FTKFQGLK 374

  Fly   905 ---ITKLDLAIAYELPELAGKYKKMSEAAL--AAIEAQQQDGTI 943
               :..::..:|.::.:|. ...:..||::  .|::....:||:
Zfish   375 PKLLESVEDMLANDIAKLM-TLVRQEEASMPSQAVQGGAFEGTM 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_001262553.1 TSP3 repeat_long 167..205 CDD:275366
EHD_N 539..569 CDD:293485 9/29 (31%)
EHD 574..813 CDD:206740 74/245 (30%)
ehd1bNP_001004578.1 EHD_N 23..55 CDD:293485 9/31 (29%)
EHD 59..299 CDD:206740 72/241 (30%)
EH 437..530 CDD:197477
EH 447..512 CDD:238009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1954
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D377342at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.