DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9297 and Reps

DIOPT Version :9

Sequence 1:NP_001262553.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_609487.2 Gene:Reps / 34542 FlyBaseID:FBgn0032341 Length:907 Species:Drosophila melanogaster


Alignment Length:639 Identity:113/639 - (17%)
Similarity:176/639 - (27%) Gaps:247/639 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 NEKDDDI-DGDGIPNDEDDDIDGDGIPNEDDDDIDGDGVPNSKDEDIDGDGVPNSKDEDIDGDGK 187
            |.:.:.: |...:|: .|.:::    .||..||..|.|      ...||.||.:|...:..|..:
  Fly   134 NSQQEQLQDTSDVPS-TDSEVE----QNESVDDATGHG------RGTDGCGVVSSSSRENVGRRR 187

  Fly   188 ANHEDDDLDGDGTPNHEDEDLDGDGVPNEEDDDLDGDGKINHEDE-----DLDGDGVKNDEDEDL 247
                     |.||         |.|.|.....:.|.....|...|     |....|:..||...|
  Fly   188 ---------GGGT---------GGGSPEAWSTNSDSPTPTNSVAERPWAQDTLWQGLLGDEHRQL 234

  Fly   248 DG---DGKVNHEDEDLDGDG----------------------VKNEKDDDLDGDGTNNSQDEDLD 287
            .|   :....|..:|.|.:.                      |:.:....|.|....|.    .:
  Fly   235 LGTEEESSDRHSSDDDDNESELVTIYQITPEQREYYNKQFRTVQRDPHGLLSGQAARNF----FE 295

  Fly   288 GDGVPNEK--------DDDLDGDGILNEHDGDV-------------------------------D 313
            ...:|.|:        |...||...|:|....:                               .
  Fly   296 KSRIPVEELRHIWQLCDVTRDGALSLSEFTAAMHLVVLRRNNIPLPTSLPHCLHPNVLQAAASGS 360

  Fly   314 GDGV--------PNEHDHKDSGENADDDDDDDDED----------------------DKEAV--- 345
            |.||        |.|....|.....|||:||..::                      ||..:   
  Fly   361 GQGVTSSSSAALPQEPPEADLLHLNDDDEDDHTDNTIIAGNLSGSSTTSKPRPNVPSDKNIMNLS 425

  Fly   346 --------KKRSKREVDAAPVLDI----EAPPSPAEEFPVEEEIVKEASAEEEAEVEA--VK-EE 395
                    ...||||  |.|...:    ....||..|.||...:...|||.:...|.:  .| .|
  Fly   426 SISTSSQASNSSKRE--ATPQNSLGKNRSISNSPNVEKPVSGTVSSTASAVDSTNVSSQWTKFSE 488

  Fly   396 EPEQEAV---------------------QEPEPEPVV------------EPEAEVQPEPVQ---- 423
            .|...||                     ..|..:||:            .|:. :.|.|::    
  Fly   489 SPTTSAVSVQSTTGAAPVVAAGAAASGASSPGLKPVLFDMKRSAQDVVSNPQI-LHPVPLRVTPI 552

  Fly   424 --------QEEEKAESAEAKEEEKPAPVEEAEAEEES-----------------------VQPEA 457
                    :...:.|||.|:.|:.|..:.......:|                       :|...
  Fly   553 GTAIASSAESSNENESAVAQREDSPKAISSTTVNNQSSAVVPGISGVAGSSHRDSSDLRAIQRPQ 617

  Fly   458 APKEPEAVQEEAQEDEPQTDGAQDAADDDDDTKPEDELLWEGHIPENRRSRQHITELLQLDEEFN 522
            |.|.|  .:..|....||.:.:..:....:..:|:     ..::..:..|::....|.......:
  Fly   618 AKKLP--AKNSALPPPPQREPSIGSTGPSESQEPQ-----AAYVASSLASKKEPPPLPPPRPHRH 675

  Fly   523 AREKATDNVAEIILRDIK----------RIYENAVKPLETLYKYRDLSNRHFSD 566
            ||..:.|      |...|          .|...|...::|...:.|.:  ||:|
  Fly   676 ARSSSLD------LNKFKIGATGGAQQAEITAQASFDMQTSTGFADFT--HFAD 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_001262553.1 TSP3 repeat_long 167..205 CDD:275366 9/37 (24%)
EHD_N 539..569 CDD:293485 8/38 (21%)
EHD 574..813 CDD:206740
RepsNP_609487.2 EH 262..345 CDD:197477 11/86 (13%)
EH 270..336 CDD:238009 11/69 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11216
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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