DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9297 and Srl

DIOPT Version :10

Sequence 1:NP_788674.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001424252.1 Gene:Srl / 302948 RGDID:1306564 Length:916 Species:Rattus norvegicus


Alignment Length:961 Identity:300/961 - (31%)
Similarity:453/961 - (47%) Gaps:184/961 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GSGELQSDQPRGDDD-----DDDDDGGHSAVDEK--------------------DTIEIETVELD 93
            |..|||.....|.:|     ::....|.::::||                    |..|.|:.|..
  Rat    18 GQAELQVSASGGTEDVGNLLENHFSAGDASLEEKERALYADAAPGDKNLLLHYPDGREAESFEQP 82

  Fly    94 STEDAKSANDLDGDGIPDDEDDDIDGDGIPNEKDDDIDGDGIPNDEDDDIDGDGI--------PN 150
            ......:||   |.| .:.|....:.....:....|::|   |.:|::.....|.        |.
  Rat    83 PAGAPSTAN---GQG-SESEASLSNSSAAESAPPGDVEG---PGEEEEGPHAAGTLPPGGAEGPE 140

  Fly   151 EDDDDIDGDGVPNSKDEDIDGDGVPNSKDEDIDGDGKANHE---DDDLDGDGTPNHEDEDLDGDG 212
            |..:...|:    ...::..|.|:|.        :|.||.|   .::|.|.......:|...|..
  Rat   141 ERPEFSSGE----EAGQEEAGVGLPT--------EGAANMEAEAQEELQGRLGDGPMEEAAAGAA 193

  Fly   213 VP----NEEDDDLDGDGKI--NHEDEDLDG--DGVKNDEDEDLDGDGKVNHEDEDLDGDGVKNEK 269
            .|    :.|.::.:|:|.|  :|:..:|||  |.:...||.|.|...:...|.||          
  Rat   194 EPVAPQSTEGEEAEGEGSIGSDHQSTELDGAQDAIPAGEDSDADVAAEAREEAED---------- 248

  Fly   270 DDDLDGDGTNNSQDEDLDGDGVPNEKDDDLDGDGILNEHDGDVDGDGVPNEHDHKDSGENADDD- 333
                        |.||   ..:|:|                    |..|...||:.:..:|..| 
  Rat   249 ------------QPED---HSLPSE--------------------DAAPPGPDHQPTDPHAVSDM 278

  Fly   334 ------DDDDDEDDKEAVKKRSKREVDAAPVLDIE--APPSPAEEFPVEEEIVKEASAEEEAEV- 389
                  .::|.||        ||.||||....:.|  ..|.|:.|.....|..:::...:.:|| 
  Rat   279 ASSEVGAEEDAED--------SKAEVDAETGEEAEDQGEPRPSLEAGSAREASEKSEDTQSSEVR 335

  Fly   390 ---------------EAVKEEEPEQEAVQEPEPEPVVEPEAEVQPEPVQQEEEKAESAEAKEEEK 439
                           ||..|||..:|..:|....|..|...|...:....|||.:.|.||.|.:|
  Rat   336 ETEGQASGMSEEDLAEASSEEEGGEEDGRENGGLPSKEESGEDSGDGASSEEEGSTSGEAAEPQK 400

  Fly   440 PAPV-----EEAEAEEESVQPEAAPKEPEAVQEEAQEDEPQTDG-----AQDAADDDDDTKPEDE 494
            ....     |.|:.:.|.:...:...:.:..:.||.|:..|..|     .|:.|:|..:..|   
  Rat   401 TPRATGHEEEGAQLDVEDLNTGSEGVKTQDTEAEASEERQQGRGNPVIAHQEEAEDVSEEAP--- 462

  Fly   495 LLWEGHIPENRRSRQHITELLQLDEEFNAREKATDNVAEIILRDIKRIYENAVKPLETLYKYRDL 559
                      .|.|.||.:.|.|:|     :|..|:.:.::.| :::||..::||||..|||.:|
  Rat   463 ----------MRDRSHIEKTLMLNE-----DKPADDYSAVLQR-LRKIYHTSIKPLEQSYKYNEL 511

  Fly   560 SNRHFS------------DPEIFSKPLILFMGPWSGGKSSILNYLTDNEYTPNSLRTGAEPSPAY 612
            .....:            |.||.|||::||:||||.|||:::|||...|.|...|.|||||:.:.
  Rat   512 RQHEITVLGMAPRALSILDGEITSKPMVLFLGPWSVGKSTMINYLLGLEDTRYQLYTGAEPTTSE 576

  Fly   613 FNILMWGNETEVLDGTQLAAD--YTFAGLQKFGQGLEERLRGLKMKSKILEKVNIVEIPGILEVR 675
            |.:||.|.:.:.::|..:|||  .:|:.|:||||...|:|.|:::..|:||:|..|:.|||:|.|
  Rat   577 FTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPHKLLERVTFVDTPGIIENR 641

  Fly   676 KQVSRVFPFNDACQWFIDRADIIFLVYDPAKLDVGPETEAILDQLKGREYQTRIILNKADTVKPE 740
            ||..|.:||||.|||||||||:||:|:||.|||||.|.|.:..||||||.|.||||||||.:..:
  Rat   642 KQQERGYPFNDVCQWFIDRADLIFVVFDPTKLDVGLELEMLFRQLKGRESQIRIILNKADNLATQ 706

  Fly   741 ELLRVQGALIWNISPLMSSAQPPLMYTTSLWTHPYQDGAPARLLLAQERAFLRDLRTAIDKRIEH 805
            .|:||.|||.|:::||::..:||.:|.:|.|...|:......|.|.:|.:.|.||...|:.|:|:
  Rat   707 MLMRVYGALFWSLAPLINVTEPPRVYVSSFWPQDYKPDTHRDLFLKEEISLLEDLNQVIENRLEN 771

  Fly   806 KIASARRFAVRVRNHAKMVDCYLNTFNNHKTLFGNKKRIADDIIDHPQNYHIYEGLSTLTNISRY 870
            |||..|:.|:|||.||.:||.||.|:.:..|.|.:.:.:..||::.|..::|::.:...||:|::
  Rat   772 KIAFIRQHAIRVRIHALLVDRYLQTYKDKMTFFSDGELVFKDIVEDPDKFYIFKTILAKTNVSKF 836

  Fly   871 DLPDPEVYRDFFRLNPLYEFKKLRDTCTYFRGCPITKLDLAIAYELPELAG 921
            |||:.|.|:|||.:||:..||.|...|:|..||.:.|::.||..|||.|.|
  Rat   837 DLPNREAYKDFFGINPISNFKLLSQQCSYMGGCFLEKIERAITQELPSLLG 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_788674.1 MSCRAMM_ClfA <93..367 CDD:468110 63/301 (21%)
TSP3 repeat_long 167..205 CDD:275366 9/40 (23%)
EHD_N 539..570 CDD:465295 12/42 (29%)
EHD 574..813 CDD:206740 118/240 (49%)
SrlNP_001424252.1 None

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