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Protein Alignment CG9297 and Ehd2

DIOPT Version :9

Sequence 1:	NP_001262553.1	Gene:	CG9297 / 41688	FlyBaseID:	FBgn0038181	Length:	952	Species:	Drosophila melanogaster
Sequence 2:	NP_694708.2	Gene:	Ehd2 / 259300	MGIID:	2154274	Length:	543	Species:	Mus musculus

Alignment Length:	414	Identity:	116/414 - (28%)
Similarity:	198/414 - (47%)	Gaps:	29/414 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly   535 ILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSKPLILFMGPWSGGKSSILNYLTDNEYTP 599
            :...:|.:|...:.|||..|::....:....|.:...||::|..|.:|.||:|.:.||.:.| .|
Mouse    21 VTSSLKELYRTKLLPLEEHYRFGSFHSPALEDADFDGKPMVLVAGQYSTGKTSFIQYLLEQE-VP 84

  Fly   600 NSLRTGAEPSPAYFNILMWGNETEVLDGTQLAAD--YTFAGLQKFGQGLEERLRGLKMKSKILEK 662
            .| |.|.||:...|..:|.|.....:.|..|..|  ..|..|..||.....|....::.:::||.
Mouse    85 GS-RVGPEPTTDCFVAVMHGETEGTVPGNALVVDPEKPFRKLNPFGNTFLNRFMCAQLPNQVLES 148

  Fly   663 VNIVEIPGILEVRKQ-VSRVFPFNDACQWFIDRADIIFLVYDPAKLDVGPETEAILDQLKGREYQ 726
            ::|::.||||...|| |||.:.|....:||.:|.|:|.|::|..||::..|....:..|:|.|.:
Mouse   149 ISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAHKLEISDEFSEAIGALRGHEDK 213

  Fly   727 TRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPLMYTTSLWTHPYQDGAPARLLLAQERAF 791
            .|::|||||.|:.::|:||.|||:|.:..::.:.:...:|..|.|:.|.......||...:|:..
Mouse   214 IRVVLNKADMVETQQLMRVYGALMWALGKVVGTPEVLRVYIGSFWSQPLLVPDNRRLFELEEQDL 278

  Fly   792 LRDL----RTAIDKRIEHKIASARRFAVRVRNHAKMVDCYLNTFNNHKTLFGNKKRIADDIIDHP 852
            .||:    |.|..:::...:..||    .||.||.::. ||.  ....|:||.:.:....|:..|
Mouse   279 FRDIQGLPRHAALRKLNDLVKRAR----LVRVHAYIIS-YLK--KEMPTVFGKENKKKQLILKLP 336

  Fly   853 QNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNPLYEFKKLRDTCTYFRGCPITKLDLAIAYELP 917
            .   |:..:....:||..|.||.:..::....:...:|..|:...       :..||..:|.::.
Mouse   337 V---IFAKIQLEHHISPGDFPDCQKMQELLMAHDFTKFHSLKPKL-------LEALDDMLAQDIA 391

  Fly   918 ELAGKYKKMSEAALAAIEAQQQDG 941
            :|   ...:.:..|.::||..|.|
Mouse   392 KL---MPLLRQEELESVEAGVQGG 412

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.