DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht5 and chia.3

DIOPT Version :9

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_998378.1 Gene:chia.3 / 406819 ZFINID:ZDB-GENE-040426-2891 Length:471 Species:Danio rerio


Alignment Length:558 Identity:171/558 - (30%)
Similarity:255/558 - (45%) Gaps:125/558 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IVCYFSNWAVYRTGIGRYGLEDVPADLCTHIIYSFIGVNDKS------WDVLVIDPELDVDQGGF 87
            :.|||:||:.||.|||:|...:|...||||:||:|..:|.::      |:          |:..:
Zfish    23 MACYFTNWSQYRPGIGKYTPANVDPYLCTHLIYAFSIINQRNELVTYEWN----------DETLY 77

  Fly    88 SKFTQLKKSNPNVKLEIAVGGWAEGGSKYSQMVAVRDRRQSFIRSVVRFMKQYNFDGFDLDWEYP 152
            ..|.:||..||.:|..:|||||..|.:::|.||:....|::||:|.::|::.:.|||.|||||||
Zfish    78 KAFNELKNKNPTLKTLLAVGGWNFGSAQFSIMVSNPANRKTFIQSTIKFLRTHGFDGLDLDWEYP 142

  Fly   153 GATDRGGNYGDKDKFLYFVEELRRAFDREGRG-----WEITMAVPVAKFRLNEGYHVPELCEALD 212
            ||  ||....||.:|....:||..|::.|.:.     ..:|.||...|..:::||.:.|:.:.|:
Zfish   143 GA--RGSPPEDKQRFTLLCKELVAAYEAESKATGNPQLMLTAAVSAGKGTIDDGYEIAEIAKYLN 205

  Fly   213 AIHAMTYDLRGNWAGFADVHSPLYKRKHDQYAYEKLNVNDGLALWEEMGCPANKLVVGVPFYGRT 277
            .|:.||||..|.|..|...:||||:...|:......|.:..:..|.:.|.|..||.:|...||||
Zfish   206 FINVMTYDFHGTWERFTGHNSPLYQGSKDEGDLIYFNTDYAMRYWRDNGTPVEKLRMGFAAYGRT 270

  Fly   278 FTLSNSNKNYNMGTYINKEAGGGA-PGPYTNASGFLAYYEICTEVMDKSKGWTVEWDDAGMVPYT 341
            |.|::|:      |.:...|.|.| .|.||..:||.:|||||..:    :|.|::|.|...|||.
Zfish   271 FRLTSSD------TSVGAPASGPASAGTYTREAGFWSYYEICGFL----EGTTIQWIDDQKVPYA 325

  Fly   342 YKDTQWVGYENEASIQIKMDFIKQRGYAGAMTWAIDMDDFHG-MCGRKNGLTQILYDNMKNYRVP 405
            .|:::|||::.:.|.:.|:.::|.:.:.||..||:|:|||.| .|.:.|........|:.:..:|
Zfish   326 TKNSEWVGFDTKESYETKVRYLKDKNFGGAFVWALDLDDFAGQFCSQGNHPLMAHLRNLLDIELP 390

  Fly   406 EPTRQTTPRPEWAKPPATPPNPDEGAVVAPTTSTTKRPKPKPKPTSSPLSPTSAPGPVPTVGSST 470
            .....|||:|                                                   |.||
Zfish   391 PMPSTTTPKP---------------------------------------------------GQST 404

  Fly   471 PKPTTKKPKKPKKTTTTTTTTPAPEKSTEEPEEVVYPVDPVEPTDPEQPMGPQFDPNEIDCTNRD 535
            .:|||        ||||||..|.|.....:|:.:.     ..|.||                   
Zfish   405 TRPTT--------TTTTTTHAPGPGFCNGKPDGLY-----AHPNDP------------------- 437

  Fly   536 FVPHPNCRKYFRCVHGKPVEFECKEGTAFHTVLNVCDW 573
                   .||:.|..|.....:|..||.|......|.|
Zfish   438 -------NKYYSCAGGHTFVEKCAVGTVFDDSCKCCVW 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 131/361 (36%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 137/380 (36%)
Trypan_PARP 367..469 CDD:114603 18/102 (18%)
CBM_14 531..578 CDD:279884 10/43 (23%)
chia.3NP_998378.1 Glyco_18 24..363 CDD:214753 131/360 (36%)
GH18_chitolectin_chitotriosidase 25..385 CDD:119351 138/381 (36%)
ChtBD2 421..469 CDD:214696 14/79 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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