DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht5 and chia.2

DIOPT Version :9

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_998414.1 Gene:chia.2 / 406338 ZFINID:ZDB-GENE-040426-2014 Length:470 Species:Danio rerio


Alignment Length:558 Identity:180/558 - (32%)
Similarity:261/558 - (46%) Gaps:130/558 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CYFSNWAVYRTGIGRYGLEDVPADLCTHIIYSFIGVNDKS------WDVLVIDPELDVDQGGFSK 89
            |||:||:.||.|||:|...:|...||||:.|:|..:|..:      |:          |:..:..
Zfish    25 CYFTNWSQYRPGIGKYTPANVDPFLCTHLFYAFAMINHANELITYEWN----------DETLYKA 79

  Fly    90 FTQLKKSNPNVKLEIAVGGWAEGGSKYSQMVAVRDRRQSFIRSVVRFMKQYNFDGFDLDWEYPGA 154
            |.:||.:||:::..:|||||..|.:::|.||:....||:||:|.::|::.|.|||.||||||||:
Zfish    80 FNELKNTNPHLRTLLAVGGWNFGSTQFSIMVSSAANRQTFIQSSIKFLRTYGFDGMDLDWEYPGS 144

  Fly   155 TDRGGNYGDKDKFLYFVEELRRAFDREG-----RGWEITMAVPVAKFRLNEGYHVPELCEALDAI 214
              ||....||.:|....:||..|::.||     |...::.||...|..:::||.:.|:.:.||.|
Zfish   145 --RGSPPEDKQRFTLLCKELLEAYEAEGKATGRRRLMLSAAVSAGKGTIDDGYEIAEIAKYLDFI 207

  Fly   215 HAMTYDLRGNWAGFADVHSPLYKRKHDQYAYEKLNVNDGLALWEEMGCPANKLVVGVPFYGRTFT 279
            :.||||..|.|..|...:||||:...|:......|.:..:..|.:.|.|..||.:|...|||||.
Zfish   208 NIMTYDFHGTWERFTGHNSPLYQGSKDEGDLVYFNTDYAMRYWRDNGTPVEKLRMGFATYGRTFR 272

  Fly   280 LSNSNKNYNMGTYINKEAGGGA-PGPYTNASGFLAYYEICTEVMDKSKGWTVEWDDAGMVPYTYK 343
            |::|:      |.:...|.|.| .|.||..:||.:|||||..:    :|.||:|.|...|||..|
Zfish   273 LTSSD------TSVGAPASGPASAGTYTREAGFWSYYEICGFL----EGTTVQWIDDQKVPYATK 327

  Fly   344 DTQWVGYENEASIQIKMDFIKQRGYAGAMTWAIDMDDFHG-MCGRKNGLTQILYDNMKNYRVPEP 407
            :::|||::.:.|.:.|:.::|.:.:.||..||:|:|||.| .||:.|   ..|..:::|....| 
Zfish   328 NSEWVGFDTKESYETKVRYLKDKKFGGAFVWALDLDDFAGQFCGQGN---HPLMGHLRNLLDIE- 388

  Fly   408 TRQTTPRPEWAKPPATPPNPDEGAVVAPTTSTTKRPKPKPKPTSSPLSPTSAPGPVPTVGSSTPK 472
                       .||..||             ||.:|                       |.||.:
Zfish   389 -----------LPPLPPP-------------TTAKP-----------------------GQSTTR 406

  Fly   473 PTTKKPKKPKKTTTTTTTTPAPEKSTEEPEEVVYPVDPVEPTDPEQPMGPQFDPNEIDCTNR--D 535
            |          ||||||||.||                          ||.|      |..:  .
Zfish   407 P----------TTTTTTTTHAP--------------------------GPGF------CNGKPDG 429

  Fly   536 FVPHPNCRKYFRCVHGKPVEFECKEGTAFHTVLNVCDW 573
            ...||:..||:.|..|:.....|..||.|......|.|
Zfish   430 LYAHPDPNKYYSCAGGQTYVDNCGAGTEFDESCKCCGW 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 133/359 (37%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 141/378 (37%)
Trypan_PARP 367..469 CDD:114603 23/102 (23%)
CBM_14 531..578 CDD:279884 13/45 (29%)
chia.2NP_998414.1 GH18_chitolectin_chitotriosidase 23..385 CDD:119351 142/384 (37%)
Glyco_18 24..363 CDD:214753 133/359 (37%)
CBM_14 423..468 CDD:279884 13/45 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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