DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht5 and chia.1

DIOPT Version :9

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_998215.1 Gene:chia.1 / 406323 ZFINID:ZDB-GENE-040426-1994 Length:455 Species:Danio rerio


Alignment Length:588 Identity:167/588 - (28%)
Similarity:250/588 - (42%) Gaps:149/588 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRYIPLLLLGVLCSWPAATVASDQASRIVCYFSNWAVYRTGIGRYGLEDVPADLCTHIIYSFIG 65
            |.:...|..||:|.|....:     ::::|||.:||:.||.|.|::..|::...||||::|:...
Zfish     1 MTKLTILAGLGILLSLQIVS-----STKLVCYMTNWSQYRPGNGKFLPENIDPFLCTHVVYALAT 60

  Fly    66 VNDKSWDVLVIDPEL-DVDQGGFSKFTQLKKSNPNVKLEIAVGGWAEGGSKYSQMVAVRDRRQSF 129
            :   |:|..:...|. |||.  :....:|||.||.:|.:::|||...|.|.|..|||..:.|::|
Zfish    61 I---SYDNQITTIEWNDVDL--YKSMNELKKVNPALKTQLSVGGLVNGVSPYINMVATPENRKAF 120

  Fly   130 IRSVVRFMKQYNFDGFDLDWEYPGATDRGGNYGDKDKFLYFVEELRRAFDREGRGWE-----ITM 189
            ||:.:.|::.:.|||.|:||:|||  ..|....||.:...|::|:|.|.::|....:     :::
Zfish   121 IRNALLFLRLHEFDGMDIDWQYPG--HNGSPPQDKQRLTTFIKEMRDAIEQEAIDTKKTPLLLSI 183

  Fly   190 AVPVAKFRLNEGYHVPELCEALDAIHAMTYDLRGNWAGFADVHSPLYKRKHDQYAYEKLNVNDGL 254
            .|...|..:...|...|:...:|.:..|:||..|:|......:|||::...|..:....|:|..|
Zfish   184 KVSAIKTTIENAYEAKEVASLVDFVTIMSYDYHGHWDPITGHNSPLFRSSFDTGSIVHHNINSSL 248

  Fly   255 ALWEEMGCPANKLVVGVPFYGRTFTLSNSNKNYNMGTYINKEAGGGAP-------GPYTNASGFL 312
            ..|...|.||::|::|:|.|||||.||.|            :.|.|||       ||||..:||.
Zfish   249 EFWLGSGAPADRLLLGLPTYGRTFMLSTS------------QTGLGAPANGPADAGPYTREAGFW 301

  Fly   313 AYYEICTEVMDKSKGWTVEWDDAGMVPYTYKDTQWVGYENEASIQIKMDFIKQRGYAGAMTWAID 377
            :|||||.  |:.|.  .:.|.|..||||..:...|||::|:.||..|:.::......||..|.:|
Zfish   302 SYYEICP--MESSV--PIHWIDEQMVPYAVQGRAWVGFDNQESITAKVQWLNSLKLGGASVWTLD 362

  Fly   378 MDDFHG-MCGRKNGLTQILYDNMKNYRVPEPTRQTTPRPEWAKPPATPPNPDEGAVVAPTTSTTK 441
            .|||.| .|  .||.          |.:....|.:...|                          
Zfish   363 FDDFAGRFC--YNGA----------YPLVNHLRNSLGFP-------------------------- 389

  Fly   442 RPKPKPKPTSSPLSPTSAPGPVPTVGSSTPKPTTKKPKKPKKTTTTTTTTPAPEKSTEEPEEVVY 506
                 ||||                  :||:|||                               
Zfish   390 -----PKPT------------------TTPRPTT------------------------------- 400

  Fly   507 PVDPVEPTDPEQPMGPQFDPNEIDCTNRDFVPHP-NCRKYFRCVHGKPVEFECKEGTAFHTVLNV 570
            ..||:......:|.|              ..||| :..|||.|..|.....:|:.|..|......
Zfish   401 TADPINSFCVGKPDG--------------LYPHPTDASKYFHCFRGNTYLQQCQPGLVFVDACKC 451

  Fly   571 CDW 573
            |||
Zfish   452 CDW 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 124/363 (34%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 131/381 (34%)
Trypan_PARP 367..469 CDD:114603 18/102 (18%)
CBM_14 531..578 CDD:279884 14/44 (32%)
chia.1NP_998215.1 Glyco_18 23..364 CDD:214753 124/363 (34%)
GH18_chitolectin_chitotriosidase 24..386 CDD:119351 133/396 (34%)
ChtBD2 407..455 CDD:214696 16/62 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.