DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht5 and chia.6

DIOPT Version :9

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_955897.2 Gene:chia.6 / 322420 ZFINID:ZDB-GENE-030131-1140 Length:480 Species:Danio rerio


Alignment Length:576 Identity:180/576 - (31%)
Similarity:260/576 - (45%) Gaps:145/576 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ASRIVCYFSNWAVYRTGIGRYGLEDVPADLCTHIIYSFIGVNDKS------WDVLVIDPELDVDQ 84
            ||::||||:||:.||..:|:|...:|...||||:||:|..:|:::      |:          |:
Zfish    20 ASQLVCYFTNWSQYRPDVGKYMPSNVDPHLCTHLIYAFSIINNENKLTTYEWN----------DE 74

  Fly    85 GGFSKFTQLKKSNPNVKLEIAVGGWAEGGSKYSQMVAVRDRRQSFIRSVVRFMKQYNFDGFDLDW 149
            ..:..|..||:||||:|..:|||||..|.:::|.||:....||:||:|.:.|::.:.|||.||||
Zfish    75 TLYQSFNGLKQSNPNLKTLLAVGGWNFGTTQFSSMVSTPQNRQTFIQSSITFLRTHGFDGLDLDW 139

  Fly   150 EYPGATDRGGNYGDKDKFLYFVEELRRAFDRE----GR-GWEITMAVPVAKFRLNEGYHVPELCE 209
            ||||:  ||....||.:|....:||..|:..|    || ...:|.||...|..::.||.:.|:.:
Zfish   140 EYPGS--RGSPPEDKQRFTLLCKELVEAYQAESAATGRPRLMLTAAVAAGKGNIDAGYEIAEIAK 202

  Fly   210 ALDAIHAMTYDLRGNWAGFADVHSPLYKRKHDQYAYEKLNVNDGLAL--WEEMGCPANKLVVGVP 272
            .||.|:.||||..|:|......:||||:...|  ..:|:..|...|:  |.:.|.|..||.:|..
Zfish   203 YLDFINIMTYDFHGSWESVTGHNSPLYRGSGD--IGDKIYYNTDFAMTYWRDQGAPVEKLRMGFA 265

  Fly   273 FYGRTFTLSNSNKNYNMGTYINKEAGGGAP-------GPYTNASGFLAYYEICTEVMDKSKGWTV 330
            .|||||.||::            .:|.|||       |.||..:||.:||||||.:    |..||
Zfish   266 AYGRTFRLSSA------------VSGVGAPASGAASAGTYTREAGFWSYYEICTFL----KQATV 314

  Fly   331 EWDDAGMVPYTYKDTQWVGYENEASIQIKMDFIKQRGYAGAMTWAIDMDDFHG-MCGRKN----G 390
            :......|||..|..:|||::|..|.:.|:|::|::|:.||..||:|:|||.| .||:..    |
Zfish   315 QQIVDQKVPYATKGQEWVGFDNMESYKTKVDYLKEKGFGGAFVWALDLDDFSGQFCGQSKYPLIG 379

  Fly   391 LTQILYDNMKNYRVPEPTRQTTPRPEWAKPPATPPNPDEGAVVAPTTSTTKRPKPKPKPTSSPLS 455
            ..:.|. |:.|                .:.|..||            |||.:|..:|        
Zfish   380 QLRTLL-NINN----------------TEFPYNPP------------STTVKPSGRP-------- 407

  Fly   456 PTSAPGPVPTVGSSTPKPTTKKPKKPKKTTTTTTTTPAPEKSTEEPEEVVYPVDPVEPTDPEQPM 520
                                         |..:.|.|             |...|  |..|..|.
Zfish   408 -----------------------------TRASATVP-------------YATRP--PVVPTAPS 428

  Fly   521 GPQFDPNEIDCTNR--DFVPHP-NCRKYFRCVHGKPVEFECKEGTAFHTVLNVCDW 573
            |..|      ||.:  ....:| :...|..|.:|:.....|...|.|......|:|
Zfish   429 GSDF------CTGKLEGIYEYPADSMIYIHCANGRTFIQRCPAKTVFDPDCKCCNW 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 139/370 (38%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 147/392 (38%)
Trypan_PARP 367..469 CDD:114603 24/106 (23%)
CBM_14 531..578 CDD:279884 11/46 (24%)
chia.6NP_955897.2 Glyco_18 22..363 CDD:214753 139/370 (38%)
GH18_chitolectin_chitotriosidase 23..385 CDD:119351 146/391 (37%)
CBM_14 433..479 CDD:279884 11/46 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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