DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht5 and Cht6

DIOPT Version :10

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001245598.1 Gene:Cht6 / 31935 FlyBaseID:FBgn0263132 Length:4611 Species:Drosophila melanogaster


Alignment Length:595 Identity:203/595 - (34%)
Similarity:301/595 - (50%) Gaps:76/595 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGVLCSWPAATVASDQASRIVCYFSNWAVYRTGIGRYGLEDVPADLCTHIIYSFIGVNDKSWDVL 74
            |.:||:.......:....|:|||::||:|||.|..::..:::...||||::|:|.|.. |...:.
  Fly    13 LFLLCALAYCINEASSEGRVVCYYTNWSVYRPGTAKFNPQNINPYLCTHLVYAFGGFT-KDNQMK 76

  Fly    75 VIDPELDVDQGGFSKFTQLKKSNPNVKLEIAVGGWAEGGSKYSQMVAVRDRRQSFIRSVVRFMKQ 139
            ..|...|::|||::|||.||..|..:|..||:|||.|..|::|.:||..:|||.||:::::|::|
  Fly    77 PFDKYQDIEQGGYAKFTGLKTYNKQLKTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQ 141

  Fly   140 YNFDGFDLDWEYPGATDRGGNYGDKDKFLYFVEELRRAFDRE----GR-GWEITMAVPVAKFRLN 199
            .:|||.||||||| |...||...|:|.:..||:|||..|:||    || ...:|||||.....::
  Fly   142 NHFDGIDLDWEYP-AHREGGKSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYID 205

  Fly   200 EGYHVPELCEALDAIHAMTYDLRGNWAGFADVHSPLYKRKHD-QYAYE-KLNVNDGLALWEEMGC 262
            :||.||:|.:.||..:.:|||...:.....:.|:|||..:.| :|.|: :||::..:..:.:.|.
  Fly   206 KGYDVPKLNKYLDWFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGA 270

  Fly   263 PANKLVVGVPFYGRTFTLSNSNKNYNMGTYINKEA-GGGAPGPYTNASGFLAYYEICTEVMDKSK 326
            ..:|||:|:|.|||::||.|..     .|.:...| |.|..|..|...|:|||||||..:.|..:
  Fly   271 DRDKLVLGIPTYGRSYTLINEE-----STELGAPAEGPGEQGDATREKGYLAYYEICQTLKDDPE 330

  Fly   327 GWTVEWDDAG-MVPYTYKDTQWVGYENEASIQIKMDFIKQRGYAGAMTWAIDMDDFHGMCGRKNG 390
             |||...:|. |.||.|:..|||||::||.::.|.:::..:|..|.|.||||.|||.|.|   ||
  Fly   331 -WTVVQPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTC---NG 391

  Fly   391 LTQILYDNMKN----------YRVPEPTRQTTPRPEWAKPPATPPNPDEGAVVAPTTSTTKRPKP 445
            ....|.:..|.          ..|.:|:....|....::..|:..|...|...||.:|  :||..
  Fly   392 KPYPLIEAAKEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASNRNRLNGKTEAPLSS--RRPSA 454

  Fly   446 KPKPTSSPLSPTSAPGPVPTVGSSTPKPTTKKPKKPKKTTTTTTTTPAPEKSTEEPEEVVYPVDP 510
            ..:|.   :|.|.||.|      ||....|:............:|||.|                
  Fly   455 TRRPA---VSSTQAPPP------STTFKLTEAEGSSLYIGGRASTTPPP---------------- 494

  Fly   511 VEPTDPEQPMGPQFDP-NEIDCTNRDFVPHP-NCRKYFRCVHGKPV-------EFECKEGTAFHT 566
              ||.|        || ::..|....|..|| :|:||:.|:...|.       .|.|..|..|:.
  Fly   495 --PTTP--------DPGSDFKCEEEGFFQHPRDCKKYYWCLDSGPSGLGIVAHMFTCPSGLYFNP 549

  Fly   567 VLNVCDWIEN 576
            ..:.||:..|
  Fly   550 AADSCDFARN 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 GH18_chitolectin_chitotriosidase 29..397 CDD:119351 153/376 (41%)
PTZ00449 <400..546 CDD:185628 36/157 (23%)
CBM_14 531..578 CDD:426342 16/54 (30%)
Cht6NP_001245598.1 GH18_chitolectin_chitotriosidase 32..404 CDD:119351 154/382 (40%)
CBM_14 506..562 CDD:426342 16/54 (30%)
PHA03247 <3683..3790 CDD:223021
CBM_14 4554..4609 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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