DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht5 and chil-27

DIOPT Version :9

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_496035.1 Gene:chil-27 / 188616 WormBaseID:WBGene00011848 Length:407 Species:Caenorhabditis elegans


Alignment Length:101 Identity:26/101 - (25%)
Similarity:52/101 - (51%) Gaps:7/101 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DQGGFSKFTQLKKS--NPNVKLEIAVGGWAEGGSK---YSQMVAVRDRRQSFIRSVVRFMKQYNF 142
            |:.....|.:||:.  :.|:|||:...  .:|.:.   :|.::...|:::.||.||:.|:|:|..
 Worm   295 DEIAMKLFLKLKEQARSENLKLELIFK--IDGRTNTFLFSSVILAHDKKRKFINSVISFLKEYRL 357

  Fly   143 DGFDLDWEYPGATDRGGNYGDKDKFLYFVEELRRAF 178
            ...||.|:...::.|...:...|:|...::|.:|.:
 Worm   358 GNSDLIWKSTRSSFRVEYFRFLDEFKSEIKERKRNY 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 26/101 (26%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 26/101 (26%)
Trypan_PARP 367..469 CDD:114603
CBM_14 531..578 CDD:279884
chil-27NP_496035.1 Glyco_hydro_18 89..>228 CDD:279094
GH18_chitinase-like 97..>235 CDD:299167
Glyco_hydro_18 261..>402 CDD:279094 26/101 (26%)
GH18_chitinase-like 268..>407 CDD:299167 26/101 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.