DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht5 and chil-16

DIOPT Version :9

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_496020.1 Gene:chil-16 / 187732 WormBaseID:WBGene00011158 Length:440 Species:Caenorhabditis elegans


Alignment Length:394 Identity:94/394 - (23%)
Similarity:164/394 - (41%) Gaps:81/394 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PAATVASDQASRIVCYFSNWAVYRTG-----IGRYGLEDVPADLCTHIIYSFIGVNDKSWDVLVI 76
            |..|...|...|||.|:     ||.|     :|:.      |.| ||.:::|          |.:
 Worm    76 PINTKNRDYKKRIVGYY-----YRNGNDSIMMGQL------AKL-THAVFAF----------LEL 118

  Fly    77 DPELDV---DQGGFSKFTQLKKSNP----NVKLEIAVGGWAEGGSKYSQMVAVRDRRQSFIRSVV 134
            .|:..:   .:.....|..|:|...    :.|:..::||.| ....:|.::...:.::.||.|::
 Worm   119 HPDGTIHFESRKAKESFLYLRKLASILKFDAKIMFSIGGPA-NTQFFSPIIQNEEMKRKFIDSII 182

  Fly   135 RFMKQYNFDGFDLDWEYPGATDRGGNYGDKDKFLYFVEELRRAFDREGRGWEITMAVPVAKFRLN 199
            .|:|||..||.||.|::..:       |||..:..|::||:.......:.:.|::.:|.|.....
 Worm   183 YFLKQYKLDGVDLFWKWSSS-------GDKFTYSSFLQELKHKLRSHRQNYIISIVLPPAGVDTW 240

  Fly   200 E-GYHVPELCEALDAIHAMTYDLRGNW--------AGFADVHSPLYKRKHDQYAYEKLNVNDGLA 255
            | ||.:.|:.|.:|.::..:.|..|.|        ...|.:...:..||:       .||:..:.
 Worm   241 ELGYDLEEIMEHVDFMNVYSMDYSGPWDNQWGTPTGPSAPLAFNIGPRKN-------FNVDWTMK 298

  Fly   256 LWEEMGCPANKLVVGVPFYGRTFTLSNSNKNYNMGTYINKEA---GGGAPG-PYTNASGFLAYYE 316
            .:........|..:.:|||.|.:  :|..:..:..|.:.:.|   ...|.| ||.:.|.  |.|:
 Worm   299 YYSCKTQQPGKFNMVIPFYARYW--NNVQEAVDPRTEVFRNAEIRNNRADGVPYMDRSS--ADYK 359

  Fly   317 ICTEVMDKSKGWTVEWDDAGMVPYTYK--DTQWVGYENEASIQIKMDFIKQRGYAGAMTWAIDMD 379
            :.:            ||:....||.:|  :.::..:||:.||.||..:.......|...|::||.
 Worm   360 MAS------------WDNLTSTPYIWKPDERRFFTFENQKSIAIKTRYAIDMNLGGVWIWSVDMG 412

  Fly   380 DFHG 383
            | ||
 Worm   413 D-HG 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 87/377 (23%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 90/382 (24%)
Trypan_PARP 367..469 CDD:114603 7/17 (41%)
CBM_14 531..578 CDD:279884
chil-16NP_496020.1 Glyco_18 87..411 CDD:214753 86/376 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.