DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht5 and chil-8

DIOPT Version :9

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001379090.1 Gene:chil-8 / 174541 WormBaseID:WBGene00007473 Length:399 Species:Caenorhabditis elegans


Alignment Length:449 Identity:109/449 - (24%)
Similarity:186/449 - (41%) Gaps:122/449 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YIPLLLLGVLCSWPAATVASDQASRIVCYFSNWA--------VYRTGIGRYGLEDVPADL----- 55
            ::.|.:.|::         |...|.:.|||.:::        ::|..|..|...|..:::     
 Worm    12 FVLLFVFGIV---------SFLVSSLFCYFYDFSNSVQSPSVLHRKRIIGYVSSDEGSEITIKQL 67

  Fly    56 --CTHIIYSFIGVNDKSWDVLVIDPELDVDQGGFSKFTQLKKS----NPNVKLEIAVGGWAEGGS 114
              .||:|::||.|:.        |..:....|....|..:|:.    |..:|:.:::||: |...
 Worm    68 EKLTHVIFAFILVHK--------DGTIKFKYGTKDGFFDMKRKSMELNRGLKVMVSIGGY-ESSP 123

  Fly   115 KYSQMVAVRDRRQSFIRSVVRFMKQYNFDGFDLDWEYPGATDRGGNYGDKDKFLYFVEELRRAF- 178
            .:|.::.  .:::..|.|:...:|:::.||.|:.|.:|..||: .||      |.|:.|||:.. 
 Worm   124 LFSDVLV--KKKKKLIASIALLVKKFDLDGVDIFWNWPSITDQ-SNY------LIFIRELRKKLT 179

  Fly   179 ---DREGRGWE--ITMAVPVAKFRLNEGYHVPELCEALDAIHAMTYD--LRGNWAGFADVHSPLY 236
               |..||..|  |::..|.:.......|...|:.|.:|.|:.:|::  ...|..|   .|||||
 Worm   180 NLKDENGRSNEYVISVIAPSSSSHSEYPYKWTEILENVDFINVITFEYFYEANKIG---PHSPLY 241

  Fly   237 KRKHDQYAYEKLNVNDGLALWEEMGC---PANKLVVGVPF----YGRTFTLSNSNKNYNMGTYIN 294
            .....       ||:|.|   :.:.|   ..|||.:.|.|    :|.| ||...:|    |.:|.
 Worm   242 GGSFG-------NVDDTL---KYLICRTRTPNKLNMVVSFNGIYWGNT-TLPFDDK----GVWIP 291

  Fly   295 KEAGGGAPGPYTNASGFLAYYEICTEVMDKSKGW-------------TVEWDDAGMVPYTYK-DT 345
            .::   |.|||                   |.||             ..||::....||.:| ||
 Worm   292 DDS---AQGPY-------------------SYGWKQFARMSHGFDQNDFEWNEETRTPYIWKADT 334

  Fly   346 -QWVGYENEASIQIKMDFIKQRGYAGAMTWAIDMDDFHGMCGRKNGLTQILYDNMKNYR 403
             |::.:|||.|:..||::.......|...:.||.||      .:|.|..::..|:.:.:
 Worm   335 QQFLTFENEKSLTEKMNYAVAHNIGGVAMYTIDDDD------EENTLLNVVVTNLPSLK 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 100/399 (25%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 104/416 (25%)
Trypan_PARP 367..469 CDD:114603 8/37 (22%)
CBM_14 531..578 CDD:279884
chil-8NP_001379090.1 Glyco_18 49..369 CDD:214753 96/377 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.