DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht5 and T19H5.6

DIOPT Version :9

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001254213.1 Gene:T19H5.6 / 13186491 WormBaseID:WBGene00044807 Length:286 Species:Caenorhabditis elegans


Alignment Length:247 Identity:54/247 - (21%)
Similarity:116/247 - (46%) Gaps:39/247 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRYIPLLLLGVLCSWPAATVASDQA-----SRIVCYFSNWAVYRTGIGRYGLEDVPADLCTHII 60
            ::.::.::.||::....:.....:.|     .|::.|::.     |...:..:|:| ::| ||.:
 Worm    37 LIIFMSIVTLGLVVVIRSFVFVEENAPTVCEKRVIGYYAG-----TEKSQITIEEV-SEL-THAV 94

  Fly    61 YSFIGVNDKSWDVLVIDPEL----DVDQGGFSKFTQL-KKSNPNVKLEIAVGGWAEGGSKYSQMV 120
            ::|:        .:..|..|    ...:..|.|..:| |..|..||:..::|| .:....:|.:.
 Worm    95 FAFV--------YMATDGTLMFSNQAQRNRFLKLKELTKNENSTVKMMFSIGG-KDNSQNFSPVT 150

  Fly   121 AVRDRRQSFIRSVVRFMKQYNFDGFDLDWEYPGATDRGGNYGDKDKFLYFVEELRRAFDREGRGW 185
            |..||::|||.:::..:::|:.||.||.|.:|.:       .|||::..|:.||::......:.:
 Worm   151 ASPDRKKSFINAILELLEKYDLDGVDLFWRWPKS-------DDKDEYAVFLRELKKQLKARRKDY 208

  Fly   186 EITMAV-PVAKFRLNEGYHVPELCEALDAIHAMTYDLRGNWAGFADVHSPLY 236
            .:::.| |:...|.:..:.:.::.:..|.|  ..|.|..|   ..|..||::
 Worm   209 ILSVVVAPLDINRWDSKFDIKKIIKHADFI--SIYGLAKN---TTDSESPMF 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 51/215 (24%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 50/214 (23%)
Trypan_PARP 367..469 CDD:114603
CBM_14 531..578 CDD:279884
T19H5.6NP_001254213.1 Glyco_18 69..>255 CDD:214753 51/213 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.