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Protein Alignment Cht5 and Chil1

DIOPT Version :9

Sequence 1:	NP_650314.1	Gene:	Cht5 / 41687	FlyBaseID:	FBgn0038180	Length:	595	Species:	Drosophila melanogaster
Sequence 2:	NP_031721.2	Gene:	Chil1 / 12654	MGIID:	1340899	Length:	389	Species:	Mus musculus

Alignment Length:	403	Identity:	142/403 - (35%)
Similarity:	217/403 - (53%)	Gaps:	48/403 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 LLLLGVLCSWPAATVASDQASRIVCYFSNWAVYRTGIGRYGLEDVPADLCTHIIYSFIGVNDKS- 70
            :|:|...||          |.::||||::|:.||.|:|.:..:.:...|||||||||..::..:
Mouse    20 VLMLLQSCS----------AYKLVCYFTSWSQYREGVGSFLPDAIQPFLCTHIIYSFANISSDNM 74

  Fly    71 -----WDVLVIDPELDVDQGGFSKFTQLKKSNPNVKLEIAVGGWAEGGSKYSQMVAVRDRRQSFI 130
                 |:          |:..:.|..:||..|.|:|..::||||..|..::|::.:..:||.:|:
Mouse    75 LSTWEWN----------DESNYDKLNKLKTRNTNLKTLLSVGGWKFGEKRFSEIASNTERRTAFV 129

  Fly   131 RSVVRFMKQYNFDGFDLDWEYPGATDRGGNYGDKDKFLYFVEELRRAFDREGR-GWE---ITMAV 191
            |||..|::.|.|||.||.|.||       ...||..|...::||...|.:|.: |.|   ::.|:
Mouse   130 RSVAPFLRSYGFDGLDLAWLYP-------RLRDKQYFSTLIKELNAEFTKEVQPGREKLLLSAAL 187

  Fly   192 PVAKFRLNEGYHVPELCEALDAIHAMTYDLRGNWAGFADVHSPLYKRKHDQYAYEKLNVNDGLAL 256
            ...|..::.||.:.::.:.||.|:.||||..|.|......||||::.:.|.......|||..:..
Mouse   188 SAGKVAIDTGYDIAQIAQHLDFINLMTYDFHGVWRQITGHHSPLFQGQKDTRFDRYSNVNYAVQY 252

  Fly   257 WEEMGCPANKLVVGVPFYGRTFTLSNSNKNYNMGTYINKEAGGGAPGPYTNASGFLAYYEICTEV 321
            ...:|..|:||::|:|.:|::|||::|..  .:|..|   :|.|.||.:|..:|.|||||||
Mouse   253 MIRLGAQASKLLMGIPTFGKSFTLASSEN--QLGAPI---SGEGLPGRFTKEAGTLAYYEIC--- 309

  Fly   322 MDKSKGWTVEWDDAGMVPYTYKDTQWVGYENEASIQIKMDFIKQRGYAGAMTWAIDMDDFHGMCG 386
             |..||..|.......||:..|..||||||::.|::.|:.|:|::..||||.||:|:|||.|.|.
Mouse   310 -DFLKGAEVHRLSNEKVPFATKGNQWVGYEDKESVKNKVGFLKEKKLAGAMVWALDLDDFQGTCQ 373

  Fly   387 RKN--GLTQILYD 397
            .|.  .||..:.|
Mouse   374 PKEFFPLTNAIKD 386

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.