DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht5 and chia.5

DIOPT Version :9

Sequence 1:NP_650314.1 Gene:Cht5 / 41687 FlyBaseID:FBgn0038180 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001103511.2 Gene:chia.5 / 100003900 ZFINID:ZDB-GENE-071004-113 Length:481 Species:Danio rerio


Alignment Length:597 Identity:175/597 - (29%)
Similarity:268/597 - (44%) Gaps:143/597 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRYIPLLLLGVLCSWPAATVASDQASRIVCYFSNWAVYRTGIGRYGLEDVPADLCTHIIYSFIG 65
            |.|:|      .:.|:..|......||:::|||:||:.||..:|:|...:|...||||:||:|..
Zfish     1 MSRFI------FIASFSLALCHFGLASQLICYFTNWSQYRPDVGKYMPSNVDPHLCTHLIYAFSI 59

  Fly    66 VNDKS------WDVLVIDPELDVDQGGFSKFTQLKKSNPNVKLEIAVGGWAEGGSKYSQMVAVRD 124
            :|:::      |:          |:..:..|..||:||.|:|..:|||||..|.:::|.||::..
Zfish    60 INNENKLTTYEWN----------DETLYQSFNGLKQSNSNLKTLLAVGGWEFGSAQFSSMVSMPQ 114

  Fly   125 RRQSFIRSVVRFMKQYNFDGFDLDWEYPGATDRGGNYGDKDKFLYFVEELRRAFDRE----GR-G 184
            .||:||:|.:.|::.:.|||.||||||||:  ||....||.:|....:||..|:..|    || .
Zfish   115 NRQTFIQSSITFLRTHGFDGLDLDWEYPGS--RGSPPEDKQRFTLLCKELVEAYQAESAATGRPR 177

  Fly   185 WEITMAVPVAKFRLNEGYHVPELCEALDAIHAMTYDLRGNWAGFADVHSPLYKRKHDQYAYEKLN 249
            ..:|.||...|..::.||.:.|:.:.||.|:.||||..|:.......:||||:...|.......|
Zfish   178 LMLTAAVAAVKGIIDAGYEIAEIAKYLDFINIMTYDFHGSQDNITGHNSPLYRDSGDTGDQIYYN 242

  Fly   250 VNDGLALWEEMGCPANKLVVGVPFYGRTFTLSNSNKNYNMGTYINKEAGGGA-PGPYTNASGFLA 313
            .:..:..|.:.|.|..||.:|...|||||.||:::..      :...|.|.| .|.||..:||.:
Zfish   243 TDFAMNYWRDQGAPVEKLRMGFAAYGRTFRLSSADNG------VGAPASGAALAGTYTREAGFWS 301

  Fly   314 YYEICT--------EVMDKSKGWTVEWDDAGMVPYTYKDTQWVGYENEASIQIKMDFIKQRGYAG 370
            ||||||        :::|:.            |||..|..:|||::::.|.:.|:|::|::|:.|
Zfish   302 YYEICTFLQGAIVQQIVDQK------------VPYATKGQEWVGFDDQESYETKVDYLKEKGFGG 354

  Fly   371 AMTWAIDMDDFHG-MCGR-KNGLTQILYD--NMKNYRVPEPTRQTTPRPEWAKPPATPPNPDEGA 431
            |..|::|:|||.| .||: |..|...|:.  |:.|...|            :.||:|...     
Zfish   355 AFVWSLDLDDFSGQFCGQGKYPLIGHLHTLLNISNTDFP------------SLPPSTTDK----- 402

  Fly   432 VVAPTTSTTKRPKPKPKPTSSPLSPTSAPGPVPTVGSSTPKPTTKKPKKPKKTTTTTTTTPAPEK 496
              |..||||         .|:.:..|:.|..||                         |.|:...
Zfish   403 --ASGTSTT---------ASAAVPHTTIPPVVP-------------------------TAPSGSD 431

  Fly   497 STEEPEEVVYPVDPVEPTDPEQPMGPQFDPNEIDCTNRDFVPHPNCRKYFRCVHGKPVEFECKEG 561
            ......|.:|    ..|.||                          :.:.:|.:|:.....|...
Zfish   432 FCASRSEGIY----ANPADP--------------------------KTFIQCANGRTFIQNCPAT 466

  Fly   562 TAFHTVLNVCDW 573
            |.|......|:|
Zfish   467 TVFDPDCTCCNW 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht5NP_650314.1 Glyco_18 28..379 CDD:214753 129/370 (35%)
GH18_chitolectin_chitotriosidase 29..397 CDD:119351 138/389 (35%)
Trypan_PARP 367..469 CDD:114603 30/105 (29%)
CBM_14 531..578 CDD:279884 7/43 (16%)
chia.5NP_001103511.2 Glyco_18 22..363 CDD:214753 129/370 (35%)
GH18_chitolectin_chitotriosidase 23..381 CDD:119351 137/387 (35%)
CBM_14 433..479 CDD:279884 12/76 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1289629at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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