DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and MMS2

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_011428.1 Gene:MMS2 / 852793 SGDID:S000003055 Length:137 Species:Saccharomyces cerevisiae


Alignment Length:127 Identity:36/127 - (28%)
Similarity:55/127 - (43%) Gaps:19/127 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RQLSELQRHPVEGF-----SAGLVSDSDI--FKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRP 69
            |.|.||::.. :||     |.||....||  .||...|:|||.:.:|...:...:.....||..|
Yeast     9 RLLEELEKGE-KGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSP 72

  Fly    70 PKMKFITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDP 131
            ||:.||::|..|.::.......:..|...|           |...:|:||:||.:...:..|
Yeast    73 PKVTFISKINLPCVNPTTGEVQTDFHTLRD-----------WKRAYTMETLLLDLRKEMATP 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 36/127 (28%)
UQ_con 10..160 CDD:278603 36/127 (28%)
MMS2NP_011428.1 COG5078 1..137 CDD:227410 36/127 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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