DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and UBC33

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001032048.2 Gene:UBC33 / 835111 AraportID:AT5G50430 Length:243 Species:Arabidopsis thaliana


Alignment Length:188 Identity:45/188 - (23%)
Similarity:81/188 - (43%) Gaps:44/188 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSELQASLLLNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEY 65
            |:|......|.::...|.:.||....| ..|.:||.:|..|:.|...|.:.|||:...:.||.||
plant     1 MAEKACIKRLQKEYRALCKEPVSHVVA-RPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEY 64

  Fly    66 PLRPPKM-------KFITEIWHPNIDKAGDVCISI--LHEPGDDKWGYEKAEERWLPVHTVETIL 121
            |.:||.:       :|:|:         ..:|:|:  .|            .|.|.|:.:|.:||
plant    65 PYKPPGITMTTPNGRFVTQ---------KKICLSMSDFH------------PESWNPMWSVSSIL 108

  Fly   122 LSVISMLTDPNDESAANVDAAKEYRENYAE-----------FKRKVTRCVRR-SQEEV 167
            ..::|.:.| |..:..:|:.:...::..|:           |::.....|.: ||::|
plant   109 TGLLSFMMD-NSPTTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQV 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 42/182 (23%)
UQ_con 10..160 CDD:278603 39/169 (23%)
UBC33NP_001032048.2 COG5078 1..161 CDD:227410 42/182 (23%)
UBCc 7..157 CDD:238117 39/172 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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