DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and AT2G18600

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001324430.1 Gene:AT2G18600 / 816375 AraportID:AT2G18600 Length:185 Species:Arabidopsis thaliana


Alignment Length:163 Identity:50/163 - (30%)
Similarity:78/163 - (47%) Gaps:27/163 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLNRQLSELQ--RHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKE----YP 66
            |.|::.:|||.  :.....|..|   .:|:..:||.|  .||   ||.:...:.:|..:    ||
plant    34 LRLHKDISELNLPKSCKISFPNG---KNDLMNFEVTI--KPD---EGYYLSGNFVFSFQVSNMYP 90

  Fly    67 LRPPKMKFITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDP 131
            ...||:|..|:::|||||..|:||::||.|.             |.||..:.|::..:..:.|:|
plant    91 HEAPKVKCKTKVYHPNIDLEGNVCLNILRED-------------WKPVLNINTVIYGLFHLFTEP 142

  Fly   132 NDESAANVDAAKEYRENYAEFKRKVTRCVRRSQ 164
            |.|...|.:||...|:|...|:..|.|.:...|
plant   143 NYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQ 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 49/160 (31%)
UQ_con 10..160 CDD:278603 48/155 (31%)
AT2G18600NP_001324430.1 UQ_con 35..171 CDD:395127 48/156 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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