DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ubc87F and Ube2q1

DIOPT Version :9

Sequence 1:	NP_650309.1	Gene:	Ubc87F / 41682	FlyBaseID:	FBgn0267383	Length:	168	Species:	Drosophila melanogaster
Sequence 2:	NP_081591.3	Gene:	Ube2q1 / 70093	MGIID:	1917343	Length:	422	Species:	Mus musculus

Alignment Length:	143	Identity:	28/143 - (19%)
Similarity:	62/143 - (43%)	Gaps:	33/143 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 LQASLLLNRQLSELQRHPVEGFSAG-----LVSDSDIFKWEVVI--IGPPDTLY---------EG 52
            :||:..|.::|.::.|.  :.|..|     ||:|| ::.|.|.:  :.....|:         ||
Mouse   250 VQATDRLMKELRDIYRS--QSFKGGNYAVELVNDS-LYDWNVKLLKVDQDSALHNDLQILKEKEG 311

  Fly    53 G-FFKAHLIFPKEYPLRPPKMKFITEIWHPN-IDKAGDVCISILHEPGDDKWGYEKAEERWLPVH 115
            . |...:..|...:|..||.::.::.:.... :...|.:|:.:|.:.|            |...:
Mouse   312 ADFILLNFSFKDNFPFDPPFVRVVSPVLSGGYVLGGGAICMELLTKQG------------WSSAY 364

  Fly   116 TVETILLSVISML 128
            ::|::::.:.:.|
Mouse   365 SIESVIMQISATL 377

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ubc87F	NP_650309.1	COG5078	1..163	CDD:227410	28/143 (20%)
Ubc87F	NP_650309.1	UQ_con	10..160	CDD:278603	26/137 (19%)
Ube2q1	NP_081591.3	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..40
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	173..221
		UBCc	253..409	CDD:238117	26/140 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910