DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and ube2j1

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:XP_012818393.1 Gene:ube2j1 / 496585 XenbaseID:XB-GENE-958459 Length:327 Species:Xenopus tropicalis


Alignment Length:157 Identity:42/157 - (26%)
Similarity:77/157 - (49%) Gaps:26/157 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRPPKMKF 74
            |.::.:|| |.|.:.:.|..:.| ::|:|...:.||||:.::||.:...::.|.|||::||.:..
 Frog    37 LMKEAAEL-RDPTDHYHAQPLED-NLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIIL 99

  Fly    75 ITEIWHPNIDKAGDVCISIL-HEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDPNDESAAN 138
            :|......:.|  .:|:||. |.|           |.|.|..::.|.||::|..:....:.:..:
 Frog   100 LTANGRFEVGK--KICLSISGHHP-----------ETWQPSWSIRTALLAIIGFMPTKGEGAIGS 151

  Fly   139 VDAAKEYRENYAEFKRKVTRCVRRSQE 165
            :|...|.|:..|          :|||:
 Frog   152 LDYTPEERKALA----------KRSQD 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 39/153 (25%)
UQ_con 10..160 CDD:278603 39/150 (26%)
ube2j1XP_012818393.1 UBCc 34..>141 CDD:238117 35/118 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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