DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and vih

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_648582.1 Gene:vih / 44118 FlyBaseID:FBgn0264848 Length:178 Species:Drosophila melanogaster


Alignment Length:152 Identity:54/152 - (35%)
Similarity:79/152 - (51%) Gaps:20/152 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRPPKMKF 74
            |:::|..|......|.|| .....:||||...|.||.:|:|.|..::..|.||..||...|.:||
  Fly    37 LHKELMNLMMANERGISA-FPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKF 100

  Fly    75 ITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDPNDESAANV 139
            :|..:|||:|..|.:|:.||             :::|..::.|.|||||:.|:|.:||:||..|.
  Fly   101 LTSCFHPNVDLQGAICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNNESPLNA 152

  Fly   140 DAA------KEYRENYAEFKRK 155
            .||      |||::....|..|
  Fly   153 QAAMMWNDQKEYKKYLDAFYEK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 54/152 (36%)
UQ_con 10..160 CDD:278603 54/152 (36%)
vihNP_648582.1 COG5078 31..166 CDD:227410 52/142 (37%)
UQ_con 36..172 CDD:278603 52/148 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438025
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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