DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and eff

DIOPT Version :10

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_731941.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster


Alignment Length:152 Identity:60/152 - (39%)
Similarity:86/152 - (56%) Gaps:17/152 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRPPKMKF 74
            :|::|.:|.|.|....|||.|.| |:|.|:..|:||||:.|:||.|...:.||.:||.:|||:.|
  Fly     6 INKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69

  Fly    75 ITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDPNDESAANV 139
            .|.|:||||:..|.:|:.||             ..:|.|..|:..:|||:.|:|.|||.:.....
  Fly    70 TTRIYHPNINSNGSICLDIL-------------RSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121

  Fly   140 DAAKEY---RENYAEFKRKVTR 158
            :.|:.|   ||.|.|..|:.||
  Fly   122 EIARIYKTDREKYNELAREWTR 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 UBCc_UBE2G1 5..159 CDD:467415 60/152 (39%)
effNP_731941.1 UBCc_UBE2D 3..145 CDD:467412 60/152 (39%)

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