DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and ben

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001162752.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster


Alignment Length:166 Identity:55/166 - (33%)
Similarity:96/166 - (57%) Gaps:25/166 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSELQASLLLNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEY 65
            ||.|...::  ::...|.:.||.|.:| :..:::...:.|::.||.|:.:|||.||..|..|::|
  Fly     1 MSSLPRRII--KETQRLMQEPVPGINA-IPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDY 62

  Fly    66 PLRPPKMKFITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTD 130
            |:..||::|||:|:|||||:.|.:|:.:|             :::|.|...:.|||||:.::|:.
  Fly    63 PMSAPKVRFITKIYHPNIDRLGRICLDVL-------------KDKWSPALQIRTILLSIQALLSA 114

  Fly   131 PN-DESAANVDAAKEYRENYAEFKRKVTRCVRRSQE 165
            || |:..|| |.|:.::.|.||       .:|.::|
  Fly   115 PNPDDPLAN-DVAELWKVNEAE-------AIRNARE 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 54/162 (33%)
UQ_con 10..160 CDD:278603 50/150 (33%)
benNP_001162752.1 UBCc 3..149 CDD:412187 53/164 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438077
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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