DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and ube2l3b

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001076266.1 Gene:ube2l3b / 321943 ZFINID:ZDB-GENE-030131-662 Length:190 Species:Danio rerio


Alignment Length:163 Identity:49/163 - (30%)
Similarity:88/163 - (53%) Gaps:13/163 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQASLLLNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLR 68
            |..||....:|.|:::..::.|....|.:|:|..|:.:|: |.:..|:.|.|:..:|||.|||.:
Zfish    37 LNLSLHSLTELEEIRKSGMKNFRNIQVDESNILTWQGLIV-PDNPPYDKGAFRIEIIFPAEYPFK 100

  Fly    69 PPKMKFITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDPND 133
            |||:.|.|:|:|||||:.|.||:.::            :.|.|.|....:.::.|:|:::.||..
Zfish   101 PPKITFKTKIYHPNIDEKGQVCLPVI------------SAENWKPATKTDQVIQSLIALVNDPQP 153

  Fly   134 ESAANVDAAKEYRENYAEFKRKVTRCVRRSQEE 166
            |.....|.|:||.::..:|.:......::..|:
Zfish   154 EHPLRADLAEEYSKDRKKFFKNAEEFTKKHGEK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 48/158 (30%)
UQ_con 10..160 CDD:278603 45/149 (30%)
ube2l3bNP_001076266.1 COG5078 44..186 CDD:227410 45/154 (29%)
UBCc 46..185 CDD:214562 45/151 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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