DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and ube2d3

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:XP_005156599.1 Gene:ube2d3 / 321832 ZFINID:ZDB-GENE-030131-551 Length:148 Species:Danio rerio


Alignment Length:145 Identity:51/145 - (35%)
Similarity:82/145 - (56%) Gaps:14/145 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRPPKMKF 74
            :.::|::|.|.|....|||.|.| |:|.|:..|:||.::.|:||.|...:.||.:||.:|||:.|
Zfish     6 IQKELTDLARDPPAQCSAGPVGD-DVFHWQATIMGPNESPYQGGVFFLTIHFPTDYPFKPPKVAF 69

  Fly    75 ITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDPNDESAANV 139
            .|.|:||||:..|.:|:.||             ..:|.|..|:..:|||:.|:|.|||.:.....
Zfish    70 TTRIYHPNINSNGSICLDIL-------------RSQWSPALTISKVLLSICSLLCDPNPDDPLVP 121

  Fly   140 DAAKEYRENYAEFKR 154
            :.|:.|:.:..::.|
Zfish   122 EIARIYKTDTEKYNR 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 51/145 (35%)
UQ_con 10..160 CDD:278603 51/145 (35%)
ube2d3XP_005156599.1 UBCc 1..146 CDD:412187 51/145 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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