DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and Ube2a

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_001013955.1 Gene:Ube2a / 298317 RGDID:1359534 Length:162 Species:Rattus norvegicus


Alignment Length:164 Identity:57/164 - (34%)
Similarity:88/164 - (53%) Gaps:24/164 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEG----------GFFKAHLIFPKE 64
            |.|....||..|..|.| |..|:::|..|..||.||..|.:|.          |.||..:.|.:|
  Rat     9 LMRDFKRLQEDPPAGVS-GAPSENNIMVWNAVIFGPEGTPFEDGTHVETTGQLGTFKLTIEFTEE 72

  Fly    65 YPLRPPKMKFITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLT 129
            ||.:||.::|:::::|||:...|.:|:.||             :.||.|.:.|.:||.|:.|:|.
  Rat    73 YPNKPPTVRFVSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLD 124

  Fly   130 DPNDESAANVDAAKEYRENYAEFKRKVTRCVRRS 163
            :||..|.||..||:.|:||..|::::|:..|.:|
  Rat   125 EPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 56/162 (35%)
UQ_con 10..160 CDD:278603 55/159 (35%)
Ube2aNP_001013955.1 UQ_con 8..155 CDD:395127 55/159 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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