DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc87F and mms2

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_588162.1 Gene:mms2 / 2538720 PomBaseID:SPCC338.05c Length:139 Species:Schizosaccharomyces pombe


Alignment Length:108 Identity:26/108 - (24%)
Similarity:44/108 - (40%) Gaps:26/108 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SAGLVSDSDI--FKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRPPKMKFITEIWHPNID-KAG 87
            |.||.:..||  ..|...|:||..:::|...:...:.....||..||.:.|::.|..|.:| :.|
pombe    27 SYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETG 91

  Fly    88 DV------CISILHEPGDDKWGYEKAEERWLPVHTVETILLSV 124
            .|      |:                 ..|...:::||:||.:
pombe    92 KVNPHKIDCL-----------------RHWKREYSMETVLLDL 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 26/108 (24%)
UQ_con 10..160 CDD:278603 26/108 (24%)
mms2NP_588162.1 UBCc 9..139 CDD:214562 26/108 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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