DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and ubc-3

DIOPT Version :10

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_490882.3 Gene:ubc-3 / 171734 WormBaseID:WBGene00006702 Length:243 Species:Caenorhabditis elegans


Alignment Length:160 Identity:81/160 - (50%)
Similarity:105/160 - (65%) Gaps:5/160 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRPPKMKF 74
            |..:|..||..|||||:.. |::.::|.|.|.|.|||.|||:||:|||.:.||..||..||.|||
 Worm    15 LTMELKNLQSQPVEGFTID-VNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKF 78

  Fly    75 ITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDPNDESAANV 139
            .|::||||:.:.||:||||||.|.||....|.|.|||.|..:|.||||||||:|.:||..|.|||
 Worm    79 TTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSVISLLNEPNTSSPANV 143

  Fly   140 DAAKEYR----ENYAEFKRKVTRCVRRSQE 165
            ||:..||    :...|:.:.||:.|..|::
 Worm   144 DASVMYRKWKEDQDPEYAKIVTKQVEESKK 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 UBCc_UBE2G1 5..159 CDD:467415 79/152 (52%)
ubc-3NP_490882.3 UBCc_UBE2R 13..179 CDD:467423 81/160 (51%)

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