DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc87F and LOC120099227

DIOPT Version :9

Sequence 1:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster
Sequence 2:XP_038956205.1 Gene:LOC120099227 / 120099227 RGDID:41199544 Length:155 Species:Rattus norvegicus


Alignment Length:153 Identity:54/153 - (35%)
Similarity:82/153 - (53%) Gaps:14/153 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LNRQLSELQRHPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRPPKMKF 74
            :.::|....:.|....|||.|:: ::|.|:..|:||.|:.|:||.|...:.||..||.||||:.|
  Rat    14 IQKELVAFSQDPPAQCSAGPVAE-NLFHWQATIMGPEDSPYQGGVFFLSVHFPSNYPFRPPKVSF 77

  Fly    75 ITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDPNDESAANV 139
            ||.|:||||.|.|.:|:.||:             ..|.|..|:..:|||:.|:|.|||.:.....
  Rat    78 ITRIYHPNISKNGSICLDILN-------------SEWSPALTISKVLLSICSLLCDPNPDDPLVP 129

  Fly   140 DAAKEYRENYAEFKRKVTRCVRR 162
            :.||.||::..::.|.......|
  Rat   130 EIAKVYRKDLKQYDRMAREWTER 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 54/153 (35%)
UQ_con 10..160 CDD:278603 53/149 (36%)
LOC120099227XP_038956205.1 UBCc 9..154 CDD:412187 54/153 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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