DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-C and ampd2b

DIOPT Version :9

Sequence 1:NP_650308.3 Gene:Adgf-C / 41680 FlyBaseID:FBgn0038173 Length:506 Species:Drosophila melanogaster
Sequence 2:XP_009302285.3 Gene:ampd2b / 571355 ZFINID:ZDB-GENE-070713-5 Length:830 Species:Danio rerio


Alignment Length:450 Identity:93/450 - (20%)
Similarity:164/450 - (36%) Gaps:153/450 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KLGELA-------QGFRNAEQNAAALHFFKAKPLIDRSAIFRFLQKMPK---GSVLHVHNTASVS 116
            ::.|||       :.|.|..:....:|   |...:::..:.||:::..|   |.::||..     
Zfish   346 EMKELAAQKKVPHRDFYNIRKVDTHIH---ASSCMNQKHLLRFIKRAMKKYPGEIVHVEQ----- 402

  Fly   117 SKWVVDDLSYMPGLLRCTTATGQSILSFRRTPKEHKCQSQYVLVSDERRNSLDRQVYDRN----F 177
                               ..||::...        .:|..:...|...::||... |||    |
Zfish   403 -------------------GRGQTLTEV--------FESMNLTAFDLSVDTLDMHA-DRNTFHRF 439

  Fly   178 ERLINLYTPVPE-LEYPTITRVWDRFQGMFDG------LSDALIYLPAFRAYHWQMLEELYNDNV 235
            ::..:.|.|:.| :......:..:..:|.:.|      ::|               |||....||
Zfish   440 DKFNSKYNPIGESILREIFIKTDNHIEGKYFGHIIKEVMAD---------------LEESKYQNV 489

  Fly   236 MYTEIRTSFKTLYDASGRT------FPRERTIHELYALNQKFMKLHPDFLGFKVIMAVYRGYELD 294
               |:|.|   :|   ||:      ..:....|::|:.|.::            ::.|.|.:::.
Zfish   490 ---ELRLS---IY---GRSRDEWDKLAQWAVTHKVYSDNVRW------------LVQVPRLFDVY 533

  Fly   295 HLKDIVEVFK---------------------KLHQALPHFLVGFDLVGQEDKGKP------LYSL 332
            |.|..:..|:                     :||..|.| :||||.|  :|:.||      |.|.
Zfish   534 HTKKQLSNFQEMLANIFMPLFEVTVNPSSHPELHLFLQH-VVGFDSV--DDESKPEHHIFNLDSP 595

  Fly   333 LPVL---RDLPPTA--RLFLHGGET-----------NWF------GASTDINLLDALLMNTTRIG 375
            .||.   .|.||.:  ..:::...|           |.|      |.:..|:.|.:..|.:..|.
Zfish   596 KPVNWTDEDNPPYSYYLYYMYANMTVLNHLRRQRNMNSFVLRPHCGEAGPIHHLVSGFMLSENIS 660

  Fly   376 HGYALAKHPILLNAVKSRRIAVELSPISNQVLHLVWDLRNHPGSQFFALDVPVVICNDDP 435
            ||..|.|.|:|.......:|.:.:||:||..|.|.:  ..:|..::.:..:.|.:..|||
Zfish   661 HGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSLFLSY--HRNPLPEYLSRGLMVSLSTDDP 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-CNP_650308.3 A_deaminase_N 5..98 CDD:285627 8/42 (19%)
adm_rel 25..501 CDD:273620 92/449 (20%)
ADGF 78..493 CDD:238646 87/426 (20%)
ampd2bXP_009302285.3 AMPD 307..803 CDD:238644 92/449 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.