DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adgf-C and ampd1

DIOPT Version :9

Sequence 1:NP_650308.3 Gene:Adgf-C / 41680 FlyBaseID:FBgn0038173 Length:506 Species:Drosophila melanogaster
Sequence 2:XP_017212786.1 Gene:ampd1 / 393867 ZFINID:ZDB-GENE-040426-1906 Length:723 Species:Danio rerio


Alignment Length:571 Identity:125/571 - (21%)
Similarity:202/571 - (35%) Gaps:176/571 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FVVLLTAQLQIQAQTALSYEQARQAVLTAEEELMTGGHTHLNTEEEKVDDIFMEYKLGELAQG-- 69
            |::.|.||     ....:|...|...|.::..:    |..||..||          :.||.:.  
Zfish   223 FLIALIAQ-----GPTKTYTHRRLKFLMSKFNV----HEMLNEMEE----------MKELKKNPH 268

  Fly    70 --FRNAEQNAAALHFFKAKPLIDRSAIFRFLQK---MPKGSVLHVHNTASVSSKWVVDDLSYMPG 129
              |.|..:....:|   |...:::..:.||::|   :....|:||.....|:.|.:...|:..| 
Zfish   269 RDFYNCRKVDTHIH---AAACMNQKHLLRFIKKSYRVDADRVVHVLKGKEVTLKELFASLNLHP- 329

  Fly   130 LLRCTTATGQSILSFRRTPKEHKCQSQYVLVSDERRNSLD----RQVYDRNFERLINLYTPVPEL 190
                                       |.|..|    |||    ||.:.| |::....|.||...
Zfish   330 ---------------------------YDLTVD----SLDVHAGRQTFQR-FDKFNAKYNPVGAS 362

  Fly   191 EYPTITRVWDRFQGMFDGLSDALIYLPAFRAYHWQMLEELYND----NVMYTEIRTSFKTLYDAS 251
            |   :..::.:.:....|            .|...:::|:.:|    ...|.|.|.|   :|..:
Zfish   363 E---LRDLYMKTENHISG------------EYFATIIKEVASDLEDARYQYAEPRLS---IYGCN 409

  Fly   252 GRTFPRERT---IHELYALNQKFMKLHPDFLGFKVIMAVYRGYE-LDHLKDIVE-VFKKLHQA-- 309
            ...:.:..:   .|.:::.:.|:|...|.      |..::||.. :.|...::| :|..:.||  
Zfish   410 PNEWAKLSSWFNKHRVFSPHLKWMIQVPR------IYDIFRGRNFVPHFGKMLENIFLPVFQATI 468

  Fly   310 -----------LPHFLVGFDLVGQEDK----------GKP-----------------LYSLLPVL 336
                       |.| :.|||.|..|.|          .||                 :|:.:.:|
Zfish   469 DPNSNPELSVFLKH-VTGFDSVDDESKHSGHMFSTKSPKPEEWDIVKNPSYTYWIYYMYANIAIL 532

  Fly   337 RDLPP-----TARLFLHGGETNWFGASTDINLLDALLMNTTRIGHGYALAKHPILLNAVKSRRIA 396
            ..|..     |.:...|.||.   ||.|  :|| |..|....|.||..|.|.|:|.......::.
Zfish   533 NQLRKERGMNTFQFRPHCGEA---GAVT--HLL-ACFMTADNISHGLNLKKSPVLQYLYYLAQVP 591

  Fly   397 VELSPISNQVLHLVWDLRNHPGSQFFALDVPVVICNDDPGFWNAKGLSYDFYYAIMSLAPNNA-G 460
            :.:||:||..|.|  :...:|..:|....:.|.:..|||         ..|:|....|....| .
Zfish   592 IAMSPLSNNSLFL--EYNKNPLLEFHKKGLMVSLSTDDP---------MQFHYTKEPLMEEYAIA 645

  Fly   461 LRLLK-------TLVWNSVRYSTLTEEEQTRAFKILELSWSRFIDDVLEGS 504
            .::.|       .:..|||..|.|:.||     ||..|..| ::.|..||:
Zfish   646 AQVFKLSTCDMCEIARNSVLQSGLSAEE-----KIHFLGTS-YLQDGPEGN 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-CNP_650308.3 A_deaminase_N 5..98 CDD:285627 19/94 (20%)
adm_rel 25..501 CDD:273620 119/548 (22%)
ADGF 78..493 CDD:238646 105/483 (22%)
ampd1XP_017212786.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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