DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-C and Ampd1

DIOPT Version :9

Sequence 1:NP_650308.3 Gene:Adgf-C / 41680 FlyBaseID:FBgn0038173 Length:506 Species:Drosophila melanogaster
Sequence 2:XP_038957689.1 Gene:Ampd1 / 25028 RGDID:2109 Length:772 Species:Rattus norvegicus


Alignment Length:564 Identity:122/564 - (21%)
Similarity:191/564 - (33%) Gaps:193/564 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 MTGGHTHLNTEE-------------EKVDDIF--MEYKLGELAQGFRNAEQNAAALHFFKAKPLI 89
            |.||..::..:|             ..:||..  |.:.|..:|||      ........:.|.|.
  Rat   235 MKGGVIYIYPDEAAASRDEPKPYPYPNLDDFLDDMNFLLALIAQG------PVKTYTHRRLKFLS 293

  Fly    90 DRSAIFRFLQKMPKGSVL----------------HVHNTASVSSKWVVDDL--SYMPGLLRCTTA 136
            .:..:.:.|.:|.:...|                |:|..|.::.|.::..:  ||.....|...:
  Rat   294 SKFQVHQMLNEMDELKELKNNPHRDFYNCRKVDTHIHAAACMNQKHLLRFIKKSYHIDADRVVYS 358

  Fly   137 TGQSILSFRRTPKEHKCQ---SQYVLVSDERRNSLD----RQVYDRNFERLINLYTPVPELEYPT 194
            |.:..|    |.||...|   ..|.|..|    |||    ||.:.| |::..:.|.||       
  Rat   359 TKEKNL----TLKELFAQLNMHPYDLTVD----SLDVHAGRQTFQR-FDKFNDKYNPV------- 407

  Fly   195 ITRVWDRFQGMFDGLSDALIYLPAFRAYHWQMLEELY--NDNVMYTEIRTSFKTLYDASGRTFPR 257
                         |.|:               |.:||  .||.:..|.   |.|:....|.....
  Rat   408 -------------GASE---------------LRDLYLKTDNYINGEY---FATIIKEVGADLVD 441

  Fly   258 ERTIH-----ELYALN-QKFMKLHPDFLGFKV-------IMAVYRGYELDHLKDIVEVFKKL--- 306
            .:..|     .:|..: .::.||...|:|.::       ::.|.|.|::...|:.:..|.|:   
  Rat   442 AKYQHAEPRLSIYGRSPDEWSKLSSWFVGNRIYCPNMTWMIQVPRIYDVFRSKNFLPHFGKMLEN 506

  Fly   307 --------------HQALPHFL---VGFDLVGQEDK----------GKP---------------- 328
                          |..|..||   .|||.|..|.|          .||                
  Rat   507 IFLPVFEATINPQTHPDLSVFLKHITGFDSVDDESKHSGHMFSSKSPKPEEWTMENNPSYTYYAY 571

  Fly   329 -LYSLLPVLRDLPPTARL--FL---HGGETNWFGASTDINLLDALLMNTTRIGHGYALAKHPILL 387
             :|:.:.||..|.....:  ||   |.||.   ||.|  :|:.|.:: ...|.||..|.|.|:|.
  Rat   572 YMYANIMVLNCLRKERGMNTFLFRPHCGEA---GALT--HLMTAFMI-ADNISHGLNLKKSPVLQ 630

  Fly   388 NAVKSRRIAVELSPISNQVLHLVWDLRNHPGSQFFALDVPVVICNDDPGFWNAKGLSYDF----- 447
            ......:|.:.:||:||..|.|  :...:|...|....:.:.:..|||       :.:.|     
  Rat   631 YLFFLAQIPIAMSPLSNNSLFL--EYAKNPFLDFLQKGLMISLSTDDP-------MQFHFTKEPL 686

  Fly   448 --YYAIMSLAPNNAGLRLLKT-----LVWNSVRYSTLTEEEQTR 484
              .|||.      |.:..|.|     :..|||....::.||:.:
  Rat   687 MEEYAIA------AQVFKLSTCDMCEVARNSVLQCGISHEEKAK 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-CNP_650308.3 A_deaminase_N 5..98 CDD:285627 13/72 (18%)
adm_rel 25..501 CDD:273620 122/564 (22%)
ADGF 78..493 CDD:238646 111/511 (22%)
Ampd1XP_038957689.1 AMPD 265..761 CDD:238644 116/534 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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