DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-C and Ampd1

DIOPT Version :9

Sequence 1:NP_650308.3 Gene:Adgf-C / 41680 FlyBaseID:FBgn0038173 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001028475.2 Gene:Ampd1 / 229665 MGIID:88015 Length:745 Species:Mus musculus


Alignment Length:568 Identity:118/568 - (20%)
Similarity:194/568 - (34%) Gaps:204/568 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FVVLLTAQLQIQAQTALSYEQARQAVLTAEEELMTGGHTHLNTEEEKVDDIFMEYKLGELA---- 67
            |::.|.||..::     :|...|...|:::.::    |..||..:|          |.||.    
Mouse   244 FLLALIAQGPVK-----TYAHRRLKFLSSKFQV----HQMLNEMDE----------LKELKNNPH 289

  Fly    68 QGFRNAEQNAAALHFFKAKPLIDRSAIFRFLQK---MPKGSVLHVHNTASVSSKWVVDDLSYMPG 129
            :.|.|..:....:|   |...:::..:.||::|   :....|::.....|::.|.:...|:..| 
Mouse   290 RDFYNCRKVDTHIH---AAACMNQKHLLRFIKKSYHIDADRVVYSTKEKSLTLKELFAKLNMHP- 350

  Fly   130 LLRCTTATGQSILSFRRTPKEHKCQSQYVLVSDERRNSLD----RQVYDRNFERLINLYTPVPEL 190
                                       |.|..|    |||    ||.:.| |::..:.|.||   
Mouse   351 ---------------------------YDLTVD----SLDVHAGRQTFQR-FDKFNDKYNPV--- 380

  Fly   191 EYPTITRVWDRFQGMFDGLSDALIYLPAFRAYHWQMLEELY--NDNVMYTEIRTSFKTLYDASGR 253
                             |.|:               |.:||  .||.:..|.   |.|:....|.
Mouse   381 -----------------GASE---------------LRDLYLKTDNYINGEY---FATIIKEVGA 410

  Fly   254 TFPRERTIH-----ELYALN-QKFMKLHPDFLGFKV-------IMAVYRGYELDHLKDIVEVFKK 305
            .....:..|     .:|..: .::.||...|:..::       ::.|.|.|::...|:.:..|.|
Mouse   411 DLVEAKYQHAEPRLSIYGRSPDEWNKLSSWFVCNRIYCPNMTWMIQVPRIYDVFRSKNFLPHFGK 475

  Fly   306 L-----------------HQALPHFL---VGFDLVGQEDK----------GKP------------ 328
            :                 |..|..||   .|||.|..|.|          .||            
Mouse   476 MLENIFLPVFEATINPQAHPDLSVFLKHITGFDSVDDESKHSGHMFSSKSPKPEEWTMENNPSYT 540

  Fly   329 -----LYSLLPVLRDLPPTARL--FL---HGGETNWFGASTDINLLDALLMNTTRIGHGYALAKH 383
                 :|:.:.||..|.....:  ||   |.||.   ||.|  :|:.|.:: ...|.||..|.|.
Mouse   541 YYAYYMYANITVLNSLRKERGMNTFLFRPHCGEA---GALT--HLMTAFMI-ADNISHGLNLKKS 599

  Fly   384 PILLNAVKSRRIAVELSPISNQVLHLVWDLRNHPGSQFFALDVPVVICNDDPGFWNAKGLSYDF- 447
            |:|.......:|.:.:||:||..|.|  :...:|...|....:.:.:..|||       :.:.| 
Mouse   600 PVLQYLFFLAQIPIAMSPLSNNSLFL--EYAKNPFLDFLQKGLMISLSTDDP-------MQFHFT 655

  Fly   448 ------YYAIMSLAPNNAGLRLLKT-----LVWNSVRYSTLTEEEQTR 484
                  .|||.      |.:..|.|     :..|||....::.||:.:
Mouse   656 KEPLMEEYAIA------AQVFKLSTCDMCEVARNSVLQCGISHEEKAK 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-CNP_650308.3 A_deaminase_N 5..98 CDD:285627 19/94 (20%)
adm_rel 25..501 CDD:273620 114/550 (21%)
ADGF 78..493 CDD:238646 102/493 (21%)
Ampd1NP_001028475.2 PLN03055 129..740 CDD:178613 118/568 (21%)
AMPD 238..734 CDD:238644 118/568 (21%)
Substrate binding. /evidence=ECO:0000250 372..377 0/4 (0%)
Substrate binding. /evidence=ECO:0000250 648..651 2/9 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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