DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-C and Ampd3

DIOPT Version :9

Sequence 1:NP_650308.3 Gene:Adgf-C / 41680 FlyBaseID:FBgn0038173 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_001359370.1 Gene:Ampd3 / 11717 MGIID:1096344 Length:775 Species:Mus musculus


Alignment Length:588 Identity:122/588 - (20%)
Similarity:197/588 - (33%) Gaps:210/588 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LMFVVLLTAQLQIQAQTALSYEQARQAVLTAEE--ELMTGG------HTHLNTEEEKVDDIFMEY 61
            ::||......|:.|...:|.|......::....  .|:|.|      |..||..|.|..   :..
Mouse   236 VLFVYDNQTMLERQEPHSLPYPDLETYIVDMSHILALITDGPTKTYCHRRLNFLESKFS---LHE 297

  Fly    62 KLGELAQ----------GFRNAEQNAAALHFFKAKPLIDRSAIFRFLQKMPKGSVLHVHNT---- 112
            .|.|:::          .|.|..:....:|   |...:::..:.||::        |.:.|    
Mouse   298 MLNEMSEFKELKSNPHRDFYNVRKVDTHIH---AAACMNQKHLLRFIK--------HTYQTEPDR 351

  Fly   113 -------ASVSSKWVVDDLSYMPGLLRCTTATGQSILSFRRTPKEHKCQSQYVLVSDERRNSLD- 169
                   ..::.:.|.|.|...|                            |.|..|    ||| 
Mouse   352 TVAEKLGRKITLRQVFDSLHMDP----------------------------YDLTVD----SLDV 384

  Fly   170 ---RQVYDRNFERLINLYTPVPELEYPTITRVWDRFQGMFDGLSDALIYLPAFRAYHWQMLE--- 228
               ||.:.| |::..:.|.||...|...:....:.:.|               ..|..:|::   
Mouse   385 HAGRQTFHR-FDKFNSKYNPVGASELRDLYLKTENYLG---------------GEYFARMVKEVA 433

  Fly   229 -ELYNDNVMYTEIRTSFKTLYDASGRTFPRERTI-------HELYALNQKFMKLHPDFLGFKVIM 285
             ||.:....|:|.|.|   :|   ||: |:|.:.       |::|:.|.::            |:
Mouse   434 RELEDSKYQYSEPRLS---IY---GRS-PKEWSSLARWFIQHKVYSPNMRW------------II 479

  Fly   286 AVYRGYELDHLKDIVEVFKKL-----------------HQALPHFL---VGFDLVGQEDKGKP-- 328
            .|.|.|::...|.::..|.|:                 |:.|..||   .|||.|..|.|...  
Mouse   480 QVPRIYDIFRSKKLLPNFGKMLENIFLPLFKATINPQDHRELHLFLKYVTGFDSVDDESKHSDHM 544

  Fly   329 -------------------------LYSLLPVLRDLPPTARL--FL---HGGETNWFGASTDINL 363
                                     :|:.:.||.:|.....|  ||   |.||     |.:..:|
Mouse   545 FSDKSPSPDLWTSEQNPPYSYYLYYMYANIMVLNNLRRERGLSTFLFRPHCGE-----AGSITHL 604

  Fly   364 LDALLMNTTRIGHGYALAKHPILLNAVKSRRIAVELSPISNQVLHLVWDLRNHPGSQFFALDVPV 428
            :.|.| ....|.||..|.|.|:|.......:|.:.:||:||..|.|  :...:|..:|....:.|
Mouse   605 VSAFL-TADNISHGLLLKKSPVLQYLYYLAQIPIAMSPLSNNSLFL--EYSKNPLREFLHKGLHV 666

  Fly   429 VICNDDPGFWNAKGLSYDFYYAIMSLAPNNAGLRLLKTLVW------------NSVRYSTLTEEE 481
            .:..|||         ..|:|...:|....|    :...||            |||..|.|:.:|
Mouse   667 SLSTDDP---------MQFHYTKEALMEEYA----IAAQVWKLSTCDLCEIARNSVLQSGLSHQE 718

  Fly   482 QTR 484
            :.:
Mouse   719 KQK 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-CNP_650308.3 A_deaminase_N 5..98 CDD:285627 21/110 (19%)
adm_rel 25..501 CDD:273620 117/568 (21%)
ADGF 78..493 CDD:238646 104/497 (21%)
Ampd3NP_001359370.1 AMP_deaminase 155..761 CDD:273618 122/588 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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