DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-D and AMD1

DIOPT Version :9

Sequence 1:NP_524345.2 Gene:Adgf-D / 41679 FlyBaseID:FBgn0038172 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_013677.1 Gene:AMD1 / 854973 SGDID:S000004498 Length:810 Species:Saccharomyces cerevisiae


Alignment Length:577 Identity:109/577 - (18%)
Similarity:184/577 - (31%) Gaps:198/577 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EQIMEAERVASLGGNIWLSSDEEKANSILM-------NAKRAEIA---------------EGLKT 74
            :|::|       .|...|:.||..::|.::       |...:.||               .|.|.
Yeast    77 QQLLE-------NGTKQLALDEHDSHSAILEQPSHSTNCSSSNIAAMNKGHDSADHASQNSGGKP 134

  Fly    75 PEKYAPAMHF-------FQG----RQYVRQSEVFR--MIQKIPKGAFLHGHNTGMV--------- 117
            ....|.|.|.       |.|    .:.||.|..::  |:.......||...::.::         
Yeast   135 RTLSASAQHILPETLKSFAGAPVVNKQVRTSASYKMGMLADDASQQFLDDPSSELIDLYSKVAEC 199

  Fly   118 -TSRWIIQNLTTTNNLYTCRNVDGLLVF------TYDQSGCHSEVQNV--CTERINAE--DRGKY 171
             ..|...|.::..|:....:|..|.:|:      :|     :|:.:.|  .|.:.:||  |..|.
Yeast   200 RNLRAKYQTISVQNDDQNPKNKPGWVVYPPPPKPSY-----NSDTKTVVPVTNKPDAEVFDFTKC 259

  Fly   172 ERQLEKHINMHGPRPEALLPNRKKIWERFENIFTTVDRLYKYRPTYCAYHKRMLEEL------CE 230
            |                 :|.....||     ||..|     ..:|..:.....:||      ..
Yeast   260 E-----------------IPGEDPDWE-----FTLND-----DDSYVVHRSGKTDELIAQIPTLR 297

  Fly   231 DNIIYAEIRASLS---PLYDDNNRTLSTLEVANELERIVEEF-------KAKHHDFIGVKVI--Y 283
            |..:..|...|:|   |......|.|..||....|..::.|:       :..|.||..|:.:  :
Yeast   298 DYYLDLEKMISISSDGPAKSFAYRRLQYLEARWNLYYLLNEYQETSVSKRNPHRDFYNVRKVDTH 362

  Fly   284 AKRNRASEEEMLRRITTFKQLHHAKPNFVI-------------------GFDL------------ 317
            ...:....::.|.|....| |.|:|...||                   |:||            
Yeast   363 VHHSACMNQKHLLRFIKHK-LRHSKDEKVIFRDGKLLTLDEVFRSLHLTGYDLSIDTLDMHAHKD 426

  Fly   318 --------------IGQEDTGE---PLNRYI--NQLSDLPSTANYFFHAGETNWN---------G 354
                          ||:....|   ..|.||  ..|:|:  |....|....:.:.         |
Yeast   427 TFHRFDKFNLKYNPIGESRLREIFLKTNNYIKGTYLADI--TKQVIFDLENSKYQNCEYRISVYG 489

  Fly   355 RT--DWNMMDAILLNTKRIGHAFA-LPKHPQLWSTIKKRNIAIEVNPISNQVLGFVWDL----RN 412
            |:  :|:.:.:.:::.|.|.|... |.:.|:|:...||..|......|...:...::::    ::
Yeast   490 RSLDEWDKLASWVIDNKVISHNVRWLVQIPRLYDIYKKTGIVQSFQDICKNLFQPLFEVTKNPQS 554

  Fly   413 HPASFLIAENFPIVISSDD--------------PGVWGA---KGLSYDFYYAFMALA 452
            ||...:..:......|.||              |.:|.|   ...||..||.:..:|
Yeast   555 HPKLHVFLQRVIGFDSVDDESKVDRRFHRKYPKPSLWEAPQNPPYSYYLYYLYSNVA 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-DNP_524345.2 A_deaminase_N 4..100 CDD:285627 20/102 (20%)
adm_rel 27..498 CDD:273620 109/577 (19%)
ADGF 80..490 CDD:238646 96/507 (19%)
AMD1NP_013677.1 AMPD 299..794 CDD:238644 61/316 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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