DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-D and AT4G04880

DIOPT Version :9

Sequence 1:NP_524345.2 Gene:Adgf-D / 41679 FlyBaseID:FBgn0038172 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001328400.1 Gene:AT4G04880 / 825826 AraportID:AT4G04880 Length:384 Species:Arabidopsis thaliana


Alignment Length:453 Identity:92/453 - (20%)
Similarity:170/453 - (37%) Gaps:130/453 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 IQKIPKGAFLHGHNTGMVTSRWIIQNLTTTNNLYTCRNVDGLLVFTYDQSGCHSEVQNVCTERIN 164
            ||.:|| ..||.|..|.:....:::       |.......|::||        ::|::|      
plant     4 IQSLPK-IELHAHLNGSIRDSTLLE-------LARVLGEKGVIVF--------ADVEHV------ 46

  Fly   165 AEDRGKYERQLEKHINMHGPRPEALLPNRKKIWERFENIFTTVDRLYKYRPTYCAYHKRMLEELC 229
                      ::|              |.:.:.|.|: :|..:.:|.....|.....:.::|:..
plant    47 ----------IQK--------------NDRSLVEVFK-LFDLIHKLTTDHKTVTRITREVVEDFA 86

  Fly   230 EDNIIYAEIRASLSPLYDDN---------------NRTLSTLEV----ANELERIVEEFKAKHH- 274
            .:|::|.|:|.  :|...|:               .|::|.:::    |::.:::       |: 
plant    87 LENVVYLELRT--TPKRSDSIGMSKRSYMEAVIQGLRSVSEVDIDFVTASDSQKL-------HNA 142

  Fly   275 -DFIGVKVIYAK-----RNRASEEEMLRRITTFKQ------------------LHHAKPNF---- 311
             |.||.|.||.:     ..|.:.|..:..::..||                  |...|...    
plant   143 GDGIGRKKIYVRLLLSIDRRETTESAMETVSVSKQAKLLRILKRLMQKTFDTLLFSLKVKLALEM 207

  Fly   312 ----VIGFDLIGQEDTGE-----PLNRYINQLSDLPSTANYFFHAGETNWNGRTDWNMMDAILLN 367
                |:|.||.|....||     |..:|... :||..|    .|.||.. |.:....|:|   ..
plant   208 RDVGVVGIDLSGNPLVGEWSTFLPALQYAKD-NDLHIT----LHCGEVP-NPKEIQAMLD---FK 263

  Fly   368 TKRIGHAFALPKHPQLWSTIKKRNIAIEVNPISNQVLGFVWDLRNHPASFLIAENFPIVISSDDP 432
            ..|||||.......  |:.:|...|.:|:...||.|...:..:..|..:.|.....|:::.:||.
plant   264 PHRIGHACFFKDED--WTKLKSFRIPVEICLTSNIVTKSISSIDIHHFADLYNAKHPLILCTDDF 326

  Fly   433 GVWGAKGLSYDFYYAFMALAPADADLRFLKQLALNSIKYAVLTSDE-RRKINRVFQRKWQEFI 494
            ||: :..||.::..|..:|..:.::...|.:.|::    |....|| ::::..:|.....|.:
plant   327 GVF-STSLSNEYALAVRSLGLSKSETFALARAAID----ATFAEDEVKQQLRFIFDSASPEHV 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-DNP_524345.2 A_deaminase_N 4..100 CDD:285627 92/453 (20%)
adm_rel 27..498 CDD:273620 92/453 (20%)
ADGF 80..490 CDD:238646 91/447 (20%)
AT4G04880NP_001328400.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11409
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.