DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-D and ampd2b

DIOPT Version :9

Sequence 1:NP_524345.2 Gene:Adgf-D / 41679 FlyBaseID:FBgn0038172 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_009302285.3 Gene:ampd2b / 571355 ZFINID:ZDB-GENE-070713-5 Length:830 Species:Danio rerio


Alignment Length:568 Identity:120/568 - (21%)
Similarity:201/568 - (35%) Gaps:188/568 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AMWFLGALVATVV-LLTGSVQATDLPYETLREQIMEAERVASL--GGNI---------WLSSDEE 54
            |:.:...:|..|| :.|.:....||||..|:|.|.:...:.:|  .|.:         :|||..:
Zfish   275 ALGYTCKMVDGVVHVYTHNSSELDLPYPDLQEYIADMNMMMALIINGPVKSFCYRRLQYLSSKFQ 339

  Fly    55 KANSILMNAKRAEIAEGLKTPEKYAPAMHFFQGRQY---------VRQSEVFRMIQKIPK---GA 107
            .  .||:|..: |:|...|.|.:     .|:..|:.         :.|..:.|.|::..|   |.
Zfish   340 M--HILLNEMK-ELAAQKKVPHR-----DFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKKYPGE 396

  Fly   108 FLHGHNTGMVTSRWIIQNLTTTNNLYTCRNVDGLLVFTYDQSGCHSEVQNVCTERINAEDRGKYE 172
            .:|.......|...:.:::..|               .:|.|        |.|..::| ||..:.
Zfish   397 IVHVEQGRGQTLTEVFESMNLT---------------AFDLS--------VDTLDMHA-DRNTFH 437

  Fly   173 RQLEKHINMHGPRPEALLPNRKKIWERFENIFTTVDRLY--KYRPTYCAYHKRMLEELCEDNIIY 235
            | .:|..:.:.|..|::|          ..||...|...  ||   :....|.::.:|.|.....
Zfish   438 R-FDKFNSKYNPIGESIL----------REIFIKTDNHIEGKY---FGHIIKEVMADLEESKYQN 488

  Fly   236 AEIRASL-----------------SPLYDDNNRTLSTLEVANELERIVEEFKAKHHDFIGVKVIY 283
            .|:|.|:                 ..:|.||.|.|.      ::.|:.:             |.:
Zfish   489 VELRLSIYGRSRDEWDKLAQWAVTHKVYSDNVRWLV------QVPRLFD-------------VYH 534

  Fly   284 AKRNRASEEEMLRRI-----------TTFKQLH----HAKPNFVIGFDLIGQEDTGEPLNRYINQ 333
            .|:..::.:|||..|           ::..:||    |     |:|||.:  :|..:|.:...| 
Zfish   535 TKKQLSNFQEMLANIFMPLFEVTVNPSSHPELHLFLQH-----VVGFDSV--DDESKPEHHIFN- 591

  Fly   334 LSDLPSTAN-------------YFFHAGETNWNG-RTDWNMMDAIL-----------------LN 367
             .|.|...|             |:.:|..|..|. |...||...:|                 :.
Zfish   592 -LDSPKPVNWTDEDNPPYSYYLYYMYANMTVLNHLRRQRNMNSFVLRPHCGEAGPIHHLVSGFML 655

  Fly   368 TKRIGHAFALPKHPQLWSTIKKRNIAIEVNPISNQVLGFVWDLRNHPASFLIAENFPIVISSDDP 432
            ::.|.|...|.|.|.|........|.|.::|:||..| |:...|| |....::....:.:|:|||
Zfish   656 SENISHGLLLRKAPVLQYLYYLAQIGIAMSPLSNNSL-FLSYHRN-PLPEYLSRGLMVSLSTDDP 718

  Fly   433 GVWGAKGLSYDF-------YYAFMA----LAPADADLRFLKQLALNSI 469
                   |.:.|       .|:..|    |:..|     :.:||.||:
Zfish   719 -------LQFHFTKEPLMEEYSIAAQVWKLSSCD-----MCELARNSV 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-DNP_524345.2 A_deaminase_N 4..100 CDD:285627 27/116 (23%)
adm_rel 27..498 CDD:273620 112/542 (21%)
ADGF 80..490 CDD:238646 96/478 (20%)
ampd2bXP_009302285.3 AMPD 307..803 CDD:238644 109/536 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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