DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adgf-D and ampd3b

DIOPT Version :9

Sequence 1:NP_524345.2 Gene:Adgf-D / 41679 FlyBaseID:FBgn0038172 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_956142.1 Gene:ampd3b / 333997 ZFINID:ZDB-GENE-030131-5929 Length:779 Species:Danio rerio


Alignment Length:558 Identity:106/558 - (18%)
Similarity:179/558 - (32%) Gaps:194/558 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GNIWLSSDEEKANSILMNAKRAEIAEGLKTP--EKYAPAMHFFQGRQYVRQSEVFRMIQKIPKGA 107
            |.|::..:|:        |.:.::...|..|  |.:|           :..|.|..||...|...
Zfish   239 GIIYVYDNED--------ALKQDLPRSLPYPDLETFA-----------IDLSHVLAMIADGPTKT 284

  Fly   108 FLHGHNTGMVTSRWIIQNLTTT------------NNLYTCRNVD------------GLLVFTYDQ 148
            :.| .....:||::.:..:...            .:.|..|.||            .||.|..|.
Zfish   285 YCH-RRLNFLTSKFQLHEMLNEMAELKELKCVPHRDFYNVRKVDTHIHAAACMNQKHLLKFIQDS 348

  Fly   149 SGCHSEVQNVCTERINAEDRGK---------------YERQLEKHINMHGPRPEALLPNRKKIWE 198
            ....:       :|:..|..||               |:..::. :::|..|         :.:.
Zfish   349 YQTEA-------DRVVLEKGGKKFTLKQVFENLKMDPYDLTVDS-LDVHAGR---------QTFH 396

  Fly   199 RFENIFTTVDRLYKYRPTYC----------------AYHKRMLEELCED----NIIYAEIRASLS 243
            ||:...:      ||.|...                .|..|:::|:..|    ...:||.|.|:.
Zfish   397 RFDKFNS------KYNPVGANELREIYLKTDNYINGEYFARLIKEVAHDLEESKYQHAEPRLSIY 455

  Fly   244 PLYDDNNRTLSTLEVANELE-----------RIVEEFKAKHHDFIGVKVIYAKRNRASEEEMLRR 297
            ....:...:||...:..:|.           ||.:.|::|       |:|      |:..:||..
Zfish   456 GRAPEEWESLSKWFIMQKLHSPNMRWMIQVPRIYDIFRSK-------KII------ANFAKMLEN 507

  Fly   298 I-------TTFKQLH---HAKPNFVIGFDLIGQED-----------------TGE---PLNRY-- 330
            |       |...|.|   |.....|.||:.:..|.                 |.|   |...|  
Zfish   508 IFLPLFQATVNPQKHKEMHVFLKHVTGFNSVDDESKHSDHIFNYKSPKPEEWTSEENPPYTYYLF 572

  Fly   331 --------INQLSDLPSTANYFF--HAGETNWNGRTDWNMMDAILLNTKRIGHAFALPKHPQLWS 385
                    :|.|........:.|  |.||..    :..:::.| .|....|.|...|.|.|.|..
Zfish   573 HMYANIMVLNNLRKERGLNTFLFRPHCGEAG----SITHLVSA-FLTADNISHGLNLKKSPVLQY 632

  Fly   386 TIKKRNIAIEVNPISNQVLGFVWDLRNHPASFLIAENFPIVISSDDPGVWGAKGLSYDFYY---A 447
            ......:.|.::|:||..| |: :...:|....:.:...:.:|:|||         ..|:|   |
Zfish   633 LYYLAQVPIAMSPLSNNSL-FL-EYSKNPLREFLQKGLCVSLSTDDP---------LQFHYTKEA 686

  Fly   448 FMALAPADADLRFLK-----QLALNSIKYAVLTSDERR 480
            .|......|.|..|.     ::|.||:..:.|:..|::
Zfish   687 LMEEYAIAAQLWKLSTCDTCEIARNSVLQSGLSHQEKK 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-DNP_524345.2 A_deaminase_N 4..100 CDD:285627 10/56 (18%)
adm_rel 27..498 CDD:273620 106/558 (19%)
ADGF 80..490 CDD:238646 98/521 (19%)
ampd3bNP_956142.1 PLN03055 157..765 CDD:178613 106/558 (19%)
metallo-dependent_hydrolases 157..765 CDD:294200 106/558 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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