DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-D and Ampd3

DIOPT Version :9

Sequence 1:NP_524345.2 Gene:Adgf-D / 41679 FlyBaseID:FBgn0038172 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_113732.2 Gene:Ampd3 / 25095 RGDID:2111 Length:801 Species:Rattus norvegicus


Alignment Length:571 Identity:110/571 - (19%)
Similarity:189/571 - (33%) Gaps:217/571 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LPYETLREQIMEAERVASLGGNIWLSSDEEKANSILMNAKRAEIAEGLKTPEK-YA-PAMHFFQG 87
            |||..|...|::...:.:|                        |.:|   |.| |. ..::|.:.
  Rat   280 LPYPDLETYIVDMSHILAL------------------------ITDG---PTKTYCHRRLNFLES 317

  Fly    88 R----QYVRQSEVFRMIQKIPKGAFLHGHNTGMVTSRWIIQNLTTTNNLYTCRNVDGLLVF---T 145
            :    :.:.:...|:.::..|...|.:            ::.:.|..:...|.|...||.|   |
  Rat   318 KFSLHEMLNEMSEFKELKSNPHRDFYN------------VRKVDTHIHAAACMNQKHLLRFIKYT 370

  Fly   146 YDQSGCHSEVQNVCTERINAEDRGK---------------YERQLEKHINMHGPRPEALLPNRKK 195
            |...          .:|..||..|:               |:..::. :::|..|         :
  Rat   371 YQTE----------PDRTVAEKLGRKITLRQVFDSLHMDPYDLTVDS-LDVHAGR---------Q 415

  Fly   196 IWERFENIFTTVDRLYKYRPTYCA----------------YHKRMLEELC---EDN-IIYAEIRA 240
            .:.||:...:      ||.|...:                |..||::|:.   ||: ..|:|.|.
  Rat   416 TFHRFDKFNS------KYNPVGASELRDLYLKTENYLGGEYFARMVKEVARELEDSKYQYSEPRL 474

  Fly   241 SL---SP--------------LYDDNNRTLSTLEVANELERIVEEFKAKHHDFIGVKVIYAKRNR 288
            |:   ||              :|..|.|.:.      ::.||.:.|::|       |::      
  Rat   475 SIYGRSPKEWSSLARWFIQHKVYSPNMRWII------QVPRIYDIFRSK-------KLL------ 520

  Fly   289 ASEEEMLRRI-------TTFKQLH---HAKPNFVIGFDLIGQED-----------------TGE- 325
            .|..:||..|       |...|.|   |....:|.|||.:..|.                 |.| 
  Rat   521 PSFGKMLENIFLPLFQATINPQDHRELHLFLKYVTGFDSVDDESKHSDHMFSDKSPSPDLWTSEQ 585

  Fly   326 --PLNRY----------INQLSDLPSTANYFF--HAGETNWNGRTDWNMMDAILLNTKRIGHAFA 376
              |.:.|          :|.|......:.:.|  |.||..    :..:::.| .|....|.|...
  Rat   586 NPPYSYYLYYMYANIMVLNNLRRERGLSTFLFRPHCGEAG----SITHLVSA-FLTADNISHGLL 645

  Fly   377 LPKHPQLWSTIKKRNIAIEVNPISNQVLGFVWDLRNHPASFLIAENFPIVISSDDPGVWGAKGLS 441
            |.|.|.|........|.|.::|:||..| |: :...:|....:.:...:.:|:|||         
  Rat   646 LKKSPVLQYLYYLAQIPIAMSPLSNNSL-FL-EYSKNPLREFLHKGLHVSLSTDDP--------- 699

  Fly   442 YDFYYAFMALAP-----------ADADLRFLKQLALNSIKYAVLTSDERRK 481
            ..|:|...||..           :..|   |.::|.||:..:.|:..|::|
  Rat   700 MQFHYTKEALMEEYAIAAQVWKLSTCD---LCEIARNSVLQSGLSHQEKQK 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-DNP_524345.2 A_deaminase_N 4..100 CDD:285627 13/80 (16%)
adm_rel 27..498 CDD:273620 108/569 (19%)
ADGF 80..490 CDD:238646 99/514 (19%)
Ampd3NP_113732.2 AMP_deaminase 181..787 CDD:273618 110/571 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.