DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-D and Ampd1

DIOPT Version :9

Sequence 1:NP_524345.2 Gene:Adgf-D / 41679 FlyBaseID:FBgn0038172 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_038957689.1 Gene:Ampd1 / 25028 RGDID:2109 Length:772 Species:Rattus norvegicus


Alignment Length:559 Identity:108/559 - (19%)
Similarity:186/559 - (33%) Gaps:192/559 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GGNIWLSSDEEKA-------------NSIL--MNAKRAEIAEG-LKTPE----KYAPAMHFFQGR 88
            ||.|::..||..|             :..|  ||...|.||:| :||..    |:..:.  ||..
  Rat   237 GGVIYIYPDEAAASRDEPKPYPYPNLDDFLDDMNFLLALIAQGPVKTYTHRRLKFLSSK--FQVH 299

  Fly    89 QYVRQSEVFRMIQKIPKGAFLHGHNTGMVTSRWIIQNLTTTNNLYTCRNVDGLL----------V 143
            |.:.:.:..:.::..|...|                        |.||.||..:          :
  Rat   300 QMLNEMDELKELKNNPHRDF------------------------YNCRKVDTHIHAAACMNQKHL 340

  Fly   144 FTYDQSGCHSEVQNVCTERINAEDRGKYERQLEKHINMHGPRPEALLPNR------KKIWERFEN 202
            ..:.:...|.:...|.   .:.:::....::|...:|||   |..|..:.      ::.::||:.
  Rat   341 LRFIKKSYHIDADRVV---YSTKEKNLTLKELFAQLNMH---PYDLTVDSLDVHAGRQTFQRFDK 399

  Fly   203 IFTTVDRLYKYRPTYCA----------------YHKRMLEELCEDNI----IYAEIRASLSPLYD 247
            ...      ||.|...:                |...:::|:..|.:    .:||.|.|:.....
  Rat   400 FND------KYNPVGASELRDLYLKTDNYINGEYFATIIKEVGADLVDAKYQHAEPRLSIYGRSP 458

  Fly   248 DNNRTLSTLEVAN-----------ELERIVEEFKAKHH--------DFIGVKVIYAKRNRASEEE 293
            |....||:..|.|           ::.||.:.|::|:.        :.|.:.|..|..|..:..:
  Rat   459 DEWSKLSSWFVGNRIYCPNMTWMIQVPRIYDVFRSKNFLPHFGKMLENIFLPVFEATINPQTHPD 523

  Fly   294 M---LRRITTFKQLHHAKPNFVIGFDLIGQED-------------------TGEPLNRY------ 330
            :   |:.||              |||.:..|.                   ...|...|      
  Rat   524 LSVFLKHIT--------------GFDSVDDESKHSGHMFSSKSPKPEEWTMENNPSYTYYAYYMY 574

  Fly   331 -----INQLSDLPSTANYFF--HAGETNWNGRTDWNMMDAILLNTKRIGHAFALPKHPQLWSTIK 388
                 :|.|........:.|  |.||..    ...::|.|.:: ...|.|...|.|.|.|.....
  Rat   575 ANIMVLNCLRKERGMNTFLFRPHCGEAG----ALTHLMTAFMI-ADNISHGLNLKKSPVLQYLFF 634

  Fly   389 KRNIAIEVNPISNQVLGFVWDLRNHPASFLIAENFPIVISSDDPGVWGAKGLSYDF-------YY 446
            ...|.|.::|:||..| |:...:|....|| .:...|.:|:|||       :.:.|       .|
  Rat   635 LAQIPIAMSPLSNNSL-FLEYAKNPFLDFL-QKGLMISLSTDDP-------MQFHFTKEPLMEEY 690

  Fly   447 AFMA----LAPADADLRFLKQLALNSIKYAVLTSDERRK 481
            |..|    |:..|     :.::|.||:....::.:|:.|
  Rat   691 AIAAQVFKLSTCD-----MCEVARNSVLQCGISHEEKAK 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-DNP_524345.2 A_deaminase_N 4..100 CDD:285627 19/75 (25%)
adm_rel 27..498 CDD:273620 108/559 (19%)
ADGF 80..490 CDD:238646 92/503 (18%)
Ampd1XP_038957689.1 AMPD 265..761 CDD:238644 102/531 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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