DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-D and Ampd2

DIOPT Version :9

Sequence 1:NP_524345.2 Gene:Adgf-D / 41679 FlyBaseID:FBgn0038172 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001276649.1 Gene:Ampd2 / 109674 MGIID:88016 Length:835 Species:Mus musculus


Alignment Length:538 Identity:113/538 - (21%)
Similarity:185/538 - (34%) Gaps:162/538 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DLPYETLREQIMEAERVASL--GGNI---------WLSSDEEKANSILMNAKRAEIAEGLKTPEK 77
            :|||..|:|.:.:...:.:|  .|.|         :|||..:.  .:|:|..: |:|...|.|.:
Mouse   292 ELPYPDLQEFVADVNVLMALIINGPIKSFCYRRLQYLSSKFQM--HVLLNEMK-ELAAQKKVPHR 353

  Fly    78 YAPAMHFFQGRQY---------VRQSEVFRMIQKIPK---GAFLHGHNTGMVTSRWIIQNLTTTN 130
                 .|:..|:.         :.|..:.|.|::..|   ...:|.......|.|.:.:::..| 
Mouse   354 -----DFYNIRKVDTHIHASSCMNQKHLLRFIKRAMKRHLEEIVHVEQGREQTLREVFESMNLT- 412

  Fly   131 NLYTCRNVDGLLVFTYDQSGCHSEVQNVCTERINAEDRGKYERQLEKHINMHGPRPEALLPNRKK 195
                          .||.|        |.|..::| ||..:.| .:|....:.|..|::|     
Mouse   413 --------------AYDLS--------VDTLDVHA-DRNTFHR-FDKFNAKYNPIGESVL----- 448

  Fly   196 IWERFENIFTTVDRLYKYRPTYCAY-HKRMLEELCEDNIIYAEIRASLSPLYDDNNRTLSTLEVA 259
                 ..||...|.  |....|.|: .|.::.:|.|.....||:|.|:.....|....|:...|.
Mouse   449 -----REIFIKTDN--KISGKYFAHIIKEVMADLEESKYQNAELRLSIYGRSRDEWDKLARWAVN 506

  Fly   260 N-----------ELERIVEEFKAKHHDFIGVKVIYAKRNRASEEEMLRRI-------TTFKQLH- 305
            :           ::.|:.:.::             .|...|:.:|||..|       |.....| 
Mouse   507 HKVHSPNVRWLVQVPRLFDVYR-------------TKGQLANFQEMLENIFLPLFEATVHPASHP 558

  Fly   306 --HAKPNFVIGFDLIGQEDTGEPLNRYINQLSDLPST---------ANYFF-------------- 345
              |.....|.|||.:  :|..:|.|...|..|.||..         |.|.:              
Mouse   559 ELHLFLEHVDGFDSV--DDESKPENHVFNLESPLPEAWVEEDNPPYAYYLYYTFANMAMLNHLRR 621

  Fly   346 -----------HAGETNWNGRTDWNMMDAILLNTKRIGHAFALPKHPQLWSTIKKRNIAIEVNPI 399
                       |.||..    ...:::.|.:| .:.|.|...|.|.|.|........|.|.::|:
Mouse   622 QRGFHTFVLRPHCGEAG----PIHHLVSAFML-AENISHGLLLRKAPVLQYLYYLAQIGIAMSPL 681

  Fly   400 SNQVLGFVWDLRNHPASFLIAENFPIVISSDDP-------------GVWGAKGLSYDFYYAFMAL 451
            ||..| |:...|| |....::....:.:|:|||             |..|.:.|..::..|....
Mouse   682 SNNSL-FLSYHRN-PLPEYLSRGLMVSLSTDDPLQFHFTKVRPRPAGSQGQEPLMEEYSIATQVW 744

  Fly   452 APADADLRFLKQLALNSI 469
            ..:..|   :.:||.||:
Mouse   745 KLSSCD---MCELARNSV 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-DNP_524345.2 A_deaminase_N 4..100 CDD:285627 21/95 (22%)
adm_rel 27..498 CDD:273620 111/535 (21%)
ADGF 80..490 CDD:238646 96/471 (20%)
Ampd2NP_001276649.1 PLN03055 198..811 CDD:178613 113/538 (21%)
AMPD 301..808 CDD:238644 108/529 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.