DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaB and bco1

DIOPT Version :9

Sequence 1:NP_650307.2 Gene:ninaB / 41678 FlyBaseID:FBgn0002937 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_001315424.1 Gene:bco1 / 84039 ZFINID:ZDB-GENE-010508-1 Length:516 Species:Danio rerio


Alignment Length:596 Identity:191/596 - (32%)
Similarity:283/596 - (47%) Gaps:115/596 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EREIVDPIEGHHSGHIPKWICGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAIRNGRVTYQNRF 114
            :.|..:||:....|.||:|:.|:|:|||||.:.||:.|:.|.||..||||.|||..|.|||::|:
Zfish     9 KEEHPEPIKTEVKGSIPEWVQGTLIRNGPGMFSVGETTYNHWFDGMALLHSFAINKGEVTYRSRY 73

  Fly   115 VDTETLRKNRSAQRIVVTEFGTAAVPDPCHSIFDR---FAAIFRPDSGTDNSMISIYPFGDQYYT 176
            :..:|...|..|.||||:|.||.|.||||.:||.:   |.:...||. |||...:|..:|:.::.
Zfish    74 LRGDTYNSNMQANRIVVSEMGTMAYPDPCKNIFSKVITFLSHTIPDF-TDNCGNNIIKYGNDFHA 137

  Fly   177 FTETPFMHRINPCTLATEARICTTDFVGVVNHTSHPHVLPSGTVYNLGTTMTRSGPAYTIL---- 237
            .:||.::.:|:|.||.|:.:|....::.|....||.|....|..|::||.:...|....:|    
Zfish   138 TSETNYIRKIDPVTLETQEKIDYLKYLPVSIVASHTHYDKEGNSYSMGTCIAEKGKTKYMLFKVP 202

  Fly   238 --SFPHGEQMFEDAHVVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPLSVSLTEYIKAQLGGQNL 300
              |.|.|....:.|..|.|||||..|.|.|.|:||:||:||:.:||||.:.:.:...|.|...:.
Zfish   203 GESRPDGSPPLKSAEAVCTLPCRSLLTPSYYHSFGMTDNYFIFIEQPLKLDILKMATAYLRRVSW 267

  Fly   301 SACLKWFEDRPTLFHLIDRVSGKLVQT-YESEAFFYLHIINCFERDGHVVVDICSYRNPEMINCM 364
            ::|:|:..:..||.|||||.:.|.|.| :.::|....|.:|.||.|||||.|:.:|.:..:....
Zfish   268 ASCMKFHPEDSTLIHLIDRNTKKEVATKFYTDAMTVYHQVNAFEDDGHVVFDVIAYDDNNLYEFF 332

  Fly   365 YLEAI------ANMQTNPNYATLFRGRPLRFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQVSRT 423
            ||..:      .|:...|.:.        |||.||                              
Zfish   333 YLNKLKETMGATNLYCKPKFT--------RFVFPL------------------------------ 359

  Fly   424 MKHSVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQGTNG-IQL 487
                             ..|...||                  |||.::.:.|.|.:..:| |..
Zfish   360 -----------------SDQGETGE------------------NLVKLKYTTASAVKEKDGKIMC 389

  Fly   488 RPEMLCDWGCETPRIYYERYMGKNYRYFYAISSDVDAVNPGTLIKVDVWNKSCLTWCEENVYPSE 552
            :.|:||: |.|.|||.| .:.||.|||.|....|...| ...::|.|...|..:.|..::.:.||
Zfish   390 QGEVLCE-GVELPRINY-NFNGKKYRYSYMCCVDESPV-ATRIVKFDADTKQQIEWKGDDGFASE 451

  Fly   553 PIFVPSPDPKSEDDGVILASMV-----LGGLNDRYVGLIVLCAKTMTELGRC----DFHTNGPVP 608
            |:|:|.|....|||||:|..::     .||.      |:||.||:..|:.|.    :.|.:    
Zfish   452 PVFIPRPGAVDEDDGVVLTVIINNKPLQGGF------LLVLDAKSFKEIARACLDVEIHMD---- 506

  Fly   609 KCLHGWFAPNA 619
              :||:|.|.:
Zfish   507 --MHGYFIPGS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaBNP_650307.2 RPE65 52..617 CDD:281102 190/590 (32%)
bco1NP_001315424.1 RPE65 10..513 CDD:281102 190/591 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59724
OrthoDB 1 1.010 - - D342267at33208
OrthoFinder 1 1.000 - - FOG0000856
OrthoInspector 1 1.000 - - otm24986
orthoMCL 1 0.900 - - OOG6_100941
Panther 1 1.100 - - O PTHR10543
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X319
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.930

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