DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaB and BCO2

DIOPT Version :9

Sequence 1:NP_650307.2 Gene:ninaB / 41678 FlyBaseID:FBgn0002937 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_114144.5 Gene:BCO2 / 83875 HGNCID:18503 Length:579 Species:Homo sapiens


Alignment Length:646 Identity:203/646 - (31%)
Similarity:305/646 - (47%) Gaps:130/646 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VFKSFMRDFFAVKYDEQRNDPQAERLDGNGRLYPNCSSDVWLRSCEREIVDPIEGHHSGHIPKWI 69
            |||.:|           .|.||.:.:.|..|..| |.:.  |.:...|....|.....||.|||:
Human    30 VFKRYM-----------GNTPQKKAVFGQCRGLP-CVAP--LLTTVEEAPRGISARVWGHFPKWL 80

  Fly    70 CGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAIRNGRVTYQNRFVDTETLRKNRSAQRIVVTEF 134
            .|||||.|||.::.|...:.|.||..||||:|.:..|.|||:::|:.::|.:.|.:..|||::||
Human    81 NGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVISEF 145

  Fly   135 GTAAVPDPCHSIFDRFAAIF----RPDSGTDNSMISIYPFGDQYYTFTETPFMHRINPCTLATEA 195
            ||.|:||||.::|:||.:.|    :..:.|||:.::...:...||..|||.||::::..||....
Human   146 GTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTE 210

  Fly   196 RICTTDFVGVVNHTSHPHVLPSGTVYNLGTTMTRSGPAYTILSFP----------HGEQMFEDAH 250
            ::..:.|:.|...|:|||....||.||:|.:....|.:|.::..|          ||.|      
Human   211 KVDWSKFIAVNGATAHPHYDLDGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGVQ------ 269

  Fly   251 VVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPLSVSLTEYIKAQLGGQNLSACLKWFEDRPTLFH 315
            |:.::....|..|.|.|:||:|.:|.:.:||||.::|.:...:::.|:..|..:.|.....|.||
Human   270 VICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFH 334

  Fly   316 LIDRVSGKLVQ-TYESEAFFYLHIINCFERDGHVVVDICSYRNPEMINCMYLEAIANM-----QT 374
            ::::.:|:|:. .|.|:.|...|.||.||..|.|::|:|...|...:....|:.:...     |.
Human   335 VVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQV 399

  Fly   375 NPNYATLFRGRPLRFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQ------VSRTMKHSVSQYAD 433
            :.:.|..|   |.||||||.                  ..|:||:      :|.|...:|.| ||
Human   400 HNSAAKSF---PRRFVLPLN------------------VSLNAPEGDNLSPLSYTSASAVKQ-AD 442

  Fly   434 ITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQGTNGIQLRPEMLCDWGCE 498
            .|...::                      |||    ..|..:.|.                 |.|
Human   443 GTIWCSH----------------------ENL----HQEDLEKEG-----------------GIE 464

  Fly   499 TPRIYYERYMGKNYRYFYA-----ISSDVDAVNPGTLIKVDVWNKSCLTWCEENVYPSEPIFVPS 558
            .|:|||:|:.||.|.:||.     :..|       :||||||.||:...|.|:..|||||:|||:
Human   465 FPQIYYDRFSGKKYHFFYGCGFRHLVGD-------SLIKVDVVNKTLKVWREDGFYPSEPVFVPA 522

  Fly   559 PDPKSEDDGVILASMVLGGLNDRYVGLIVLCAKTMTELGRCDFHTNGPV--PKCLHGWFAP 617
            |....||.||||:.::....|:... ::||.||...||||.:.    ||  |...||.|.|
Human   523 PGTNEEDGGVILSVVITPNQNESNF-ILVLDAKNFEELGRAEV----PVQMPYGFHGTFIP 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaBNP_650307.2 RPE65 52..617 CDD:281102 190/597 (32%)
BCO2NP_114144.5 RPE65 74..577 CDD:335198 187/585 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147631
Domainoid 1 1.000 337 1.000 Domainoid score I1113
eggNOG 1 0.900 - - E1_COG3670
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12912
Inparanoid 1 1.050 337 1.000 Inparanoid score I2389
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59724
OrthoDB 1 1.010 - - D342267at33208
OrthoFinder 1 1.000 - - FOG0000856
OrthoInspector 1 1.000 - - otm40806
orthoMCL 1 0.900 - - OOG6_100941
Panther 1 1.100 - - O PTHR10543
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X319
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.770

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