DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaB and BCO2

DIOPT Version :10

Sequence 1:NP_650307.2 Gene:ninaB / 41678 FlyBaseID:FBgn0002937 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_114144.5 Gene:BCO2 / 83875 HGNCID:18503 Length:579 Species:Homo sapiens


Alignment Length:646 Identity:203/646 - (31%)
Similarity:305/646 - (47%) Gaps:130/646 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VFKSFMRDFFAVKYDEQRNDPQAERLDGNGRLYPNCSSDVWLRSCEREIVDPIEGHHSGHIPKWI 69
            |||.:|           .|.||.:.:.|..|..| |.:.  |.:...|....|.....||.|||:
Human    30 VFKRYM-----------GNTPQKKAVFGQCRGLP-CVAP--LLTTVEEAPRGISARVWGHFPKWL 80

  Fly    70 CGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAIRNGRVTYQNRFVDTETLRKNRSAQRIVVTEF 134
            .|||||.|||.::.|...:.|.||..||||:|.:..|.|||:::|:.::|.:.|.:..|||::||
Human    81 NGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVISEF 145

  Fly   135 GTAAVPDPCHSIFDRFAAIF----RPDSGTDNSMISIYPFGDQYYTFTETPFMHRINPCTLATEA 195
            ||.|:||||.::|:||.:.|    :..:.|||:.::...:...||..|||.||::::..||....
Human   146 GTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTE 210

  Fly   196 RICTTDFVGVVNHTSHPHVLPSGTVYNLGTTMTRSGPAYTILSFP----------HGEQMFEDAH 250
            ::..:.|:.|...|:|||....||.||:|.:....|.:|.::..|          ||.|      
Human   211 KVDWSKFIAVNGATAHPHYDLDGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGVQ------ 269

  Fly   251 VVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPLSVSLTEYIKAQLGGQNLSACLKWFEDRPTLFH 315
            |:.::....|..|.|.|:||:|.:|.:.:||||.::|.:...:::.|:..|..:.|.....|.||
Human   270 VICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFH 334

  Fly   316 LIDRVSGKLVQ-TYESEAFFYLHIINCFERDGHVVVDICSYRNPEMINCMYLEAIANM-----QT 374
            ::::.:|:|:. .|.|:.|...|.||.||..|.|::|:|...|...:....|:.:...     |.
Human   335 VVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQV 399

  Fly   375 NPNYATLFRGRPLRFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQ------VSRTMKHSVSQYAD 433
            :.:.|..|   |.||||||.                  ..|:||:      :|.|...:|.| ||
Human   400 HNSAAKSF---PRRFVLPLN------------------VSLNAPEGDNLSPLSYTSASAVKQ-AD 442

  Fly   434 ITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQGTNGIQLRPEMLCDWGCE 498
            .|...::                      |||    ..|..:.|.                 |.|
Human   443 GTIWCSH----------------------ENL----HQEDLEKEG-----------------GIE 464

  Fly   499 TPRIYYERYMGKNYRYFYA-----ISSDVDAVNPGTLIKVDVWNKSCLTWCEENVYPSEPIFVPS 558
            .|:|||:|:.||.|.:||.     :..|       :||||||.||:...|.|:..|||||:|||:
Human   465 FPQIYYDRFSGKKYHFFYGCGFRHLVGD-------SLIKVDVVNKTLKVWREDGFYPSEPVFVPA 522

  Fly   559 PDPKSEDDGVILASMVLGGLNDRYVGLIVLCAKTMTELGRCDFHTNGPV--PKCLHGWFAP 617
            |....||.||||:.::....|:... ::||.||...||||.:.    ||  |...||.|.|
Human   523 PGTNEEDGGVILSVVITPNQNESNF-ILVLDAKNFEELGRAEV----PVQMPYGFHGTFIP 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaBNP_650307.2 RPE65 46..617 CDD:460788 191/603 (32%)
BCO2NP_114144.5 RPE65 74..578 CDD:460788 188/586 (32%)

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