Protein Alignment ninaB and CCD1

DIOPT Version :10

• Sequence 1: NP_650307.2
• Gene: ninaB / 41678
• FlyBaseID: FBgn0002937
• Length: 620
• Species: Drosophila melanogaster
• Sequence 2: NP_191911.1
• Gene: CCD1 / 825527
• AraportID: AT3G63520
• Length: 538
• Species: Arabidopsis thaliana
• Alignment Length: 590
• Identity: 109/590 - (18%)
• Similarity: 194/590 - (32%)
• Gaps: 211/590 - (35%)

  Fly    63 GHIPKWICGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAIRNGRVTYQNRFVDTETLRKN---- 123
            |.:|:.:.|..:|.||.. |...:...|.||...::|...|::|:.||.:|:|.|..|::.
plant    69 GFLPECLNGEFVRVGPNP-KFDAVAGYHWFDGDGMIHGVRIKDGKATYVSRYVKTSRLKQEEFFG 132

  Fly   124 ------------------------RSAQRIVVTEFGTAAVPDPCHSIFDRFAAIFRPDSGTDNSM 164
                                    |:..:|:...:|                      :||.|:.
plant   133 AAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNTYG----------------------NGTANTA 175

  Fly   165 ISIYPFGDQYYTFTET--PFMHRINPCTLATEARICTTDFVGVVNH--------TSHPHVLP-SG 218
            : :|..| :.....|.  |::.::     ..:..:.|   :|::::        |:||.|.| :|
plant   176 L-VYHHG-KLLALQEADKPYVIKV-----LEDGDLQT---LGIIDYDKRLTHSFTAHPKVDPVTG 230

  Fly   219 TVYNLGTTMTRSGPAYTILSFPHGEQMFEDAHVVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPL 283
            .::..|.:.|.....|.::|        :|..:...:|.... .|..||.|.:|:.|.:.::.|:
plant   231 EMFTFGYSHTPPYLTYRVIS--------KDGIMHDPVPITIS-EPIMMHDFAITETYAIFMDLPM 286

  Fly   284 SVSLTEYIKAQLGGQNLSACLKWFEDRPTLFHLIDRVSGK--LVQTYESEAFFYLHIINCFERDG 346
            .....|.:|.:      .....:...:...|.::.|.:..  :::.:|....|..|..|.:|.:.
plant   287 HFRPKEMVKEK------KMIYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEED 345

  Fly   347 HVVVDICSYRNPEMINCMYLEAIANMQTNPNYATLFRGRPLRFVLPLGTIPPASIAKRGLVKSFS 411
            .||:..|...||::
plant   346 EVVLITCRLENPDL--------------------------------------------------- 359

  Fly   412 LAGLSAPQVSRTMKHSVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQA 476
                  ..||..:|..:..:.:..|                          |...|:.|...||
plant   360 ------DMVSGKVKEKLENFGNELY--------------------------EMRFNMKTGSASQ- 391

  Fly   477 EAFQGTNGIQLRPEMLCDWGCETPRIYYERYMGKNYRYFYAISSDVDAVNPGTLIKVDV------ 535
                         :.|.....:.||| .|.|.||..||.|....|..|...| :||.|:
plant   392 -------------KKLSASAVDFPRI-NECYTGKKQRYVYGTILDSIAKVTG-IIKFDLHAEAET 441

  Fly   536 --------WNKSCLTWCEENVYPSEPIFVPSPDPKSEDDGVILASMVLGGLNDRYVG---LIVLC 589
                    .|...:....|..|.||.|:||. :...||||.::..     ::|...|   :.|:.
plant   442 GKRMLEVGGNIKGIYDLGEGRYGSEAIYVPR-ETAEEDDGYLIFF-----VHDENTGKSCVTVID 500

  Fly   590 AKTMT 594
            ||||:
plant   501 AKTMS 505

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaB	NP_650307.2	RPE65	46..617	CDD:460788	109/590 (18%)
CCD1	NP_191911.1	PLN02491	1..538	CDD:215271	109/590 (18%)