DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaB and Bco1

DIOPT Version :10

Sequence 1:NP_650307.2 Gene:ninaB / 41678 FlyBaseID:FBgn0002937 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_067461.2 Gene:Bco1 / 63857 MGIID:1926923 Length:566 Species:Mus musculus


Alignment Length:590 Identity:192/590 - (32%)
Similarity:297/590 - (50%) Gaps:97/590 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EREIVDPIEGHHSGHIPKWICGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAIRNGRVTYQNRF 114
            ::|.::|::...:|.||.|:.|:|||||||...||:..:.|.||..||||.|:||:|.|.|::::
Mouse     9 KKEQLEPVQAKVTGSIPAWLQGTLLRNGPGMHTVGESKYNHWFDGLALLHSFSIRDGEVFYRSKY 73

  Fly   115 VDTETLRKNRSAQRIVVTEFGTAAVPDPCHSIFDR-FAAIFR--PDSGTDNSMISIYPFGDQYYT 176
            :.::|...|..|.||||:||||.|.||||.:||.: |:.:..  ||. |||.:|:|...|:.:|.
Mouse    74 LQSDTYIANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDF-TDNCLINIMKCGEDFYA 137

  Fly   177 FTETPFMHRINPCTLATEARICTTDFVGVVNHTSHPHVLPSGTVYNLGTTMTRSG-PAYTILSFP 240
            .|||.::.:|:|.||.|..::....:|.|...|||||...:|.|.|:||::...| ..|.|...|
Mouse   138 TTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGTSVVDKGRTKYVIFKIP 202

  Fly   241 --------HGEQMFEDAHVVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPLSVSLTEYIKAQLGG 297
                    .|:...:.|.|..::..|..|.|.|.|:||:|::|.|.:|||..:.:.:...|.:.|
Mouse   203 ATVPDSKKKGKSPVKHAEVFCSISSRSLLSPSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRG 267

  Fly   298 QNLSACLKWFEDRPTLFHLIDRVSGKLVQT-YESEAFFYLHIINCFERDGHVVVDICSYRNPEMI 361
            .:.::|:.:..:..|..|:||:.:.|.|.| :.::.....|.:|.:|.||.|:.|:.:|.:..:.
Mouse   268 VSWASCMSFDREDKTYIHIIDQRTRKPVPTKFYTDPMVVFHHVNAYEEDGCVLFDVIAYEDSSLY 332

  Fly   362 NCMYLEAIANMQTNPNYATLFRGRPL--RFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQVSRTM 424
            ...||   ||:..:....:.....|.  ||.:||                               
Mouse   333 QLFYL---ANLNKDFEEKSRLTSVPTLRRFAVPL------------------------------- 363

  Fly   425 KHSVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQGTNG-IQLR 488
                  :.|                   :||:.|.       |||.:..:.|.|.:..:| :..:
Mouse   364 ------HVD-------------------KDAEVGS-------NLVKVSSTTATALKEKDGHVYCQ 396

  Fly   489 PEMLCDWGCETPRIYYERYMGKNYRYFYAISSDVDAVNPGTLIKVDVWNKSCLTWCEENVYPSEP 553
            ||:|.: |.|.|||.| .|.||.|||.:|.......| |..::|.|:..||.|.|.||:.:|:||
Mouse   397 PEVLYE-GLELPRINY-AYNGKPYRYIFAAEVQWSPV-PTKILKYDILTKSSLKWSEESCWPAEP 458

  Fly   554 IFVPSPDPKSEDDGVILASMVLGGLNDRYVGLIVLCAKTMTELGR----CDFHTNGPVPKCLHGW 614
            :|||:|..|.|||||||:::|... ..:...|::|.||:.|||.|    .|.|.:      |||.
Mouse   459 LFVPTPGAKDEDDGVILSAIVSTD-PQKLPFLLILDAKSFTELARASVDADMHLD------LHGL 516

  Fly   615 FAPNA 619
            |.|:|
Mouse   517 FIPDA 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaBNP_650307.2 RPE65 46..617 CDD:460788 190/586 (32%)
Bco1NP_067461.2 RPE65 5..519 CDD:460788 190/586 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 530..566
Blue background indicates that the domain is not in the aligned region.

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