DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaB and rpe65a

DIOPT Version :9

Sequence 1:NP_650307.2 Gene:ninaB / 41678 FlyBaseID:FBgn0002937 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_957045.1 Gene:rpe65a / 393724 ZFINID:ZDB-GENE-040426-1717 Length:531 Species:Danio rerio


Alignment Length:585 Identity:179/585 - (30%)
Similarity:288/585 - (49%) Gaps:93/585 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 EIVDPIEGHHSGHIPKWICGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAIRNGRVTYQNRFVD 116
            |:.:|:....:|.||.:|.|||||.|||.::.|...|.||||..||:|:|...||:|||..:||.
Zfish    21 ELNEPLPATVTGRIPSFIKGSLLRLGPGLFEAGAEPFYHLFDGQALMHKFDFSNGQVTYFRKFVK 85

  Fly   117 TETLRKNRSAQRIVVTEFGTAAVPDPCHSIFDRFAAIFRPDSGTDNSMISIYPFGDQYYTFTETP 181
            |:...:..:.:|:|:|||||.|.||||.:||.||.:.|:....|||.::::||.|:.:|..|||.
Zfish    86 TDAYVRAITEKRVVITEFGTCAYPDPCKNIFSRFFSYFKGVEVTDNCLVNVYPIGEDFYAVTETN 150

  Fly   182 FMHRINPCTLATEARICTTDFVGVVNHTSHPHVLPSGTVYNLGTTMTRSGP-AYTILSFPHGEQ- 244
            ::.::|..||.|..::...::|.:...|:|||:...|||||:|..|.:... ||.|:..|..:: 
Zfish   151 YITKVNVDTLETLKKVDMCNYVNINGVTAHPHIERDGTVYNIGNCMGKGASLAYNIVRIPPTQKD 215

  Fly   245 ---MFEDAHVVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPLSVSLTEYIKA-QLGGQNLSACLK 305
               ..|.:.||...|...:..|.|:|:||:|::|||.||.|:.::|.:::.| .:.|.|...|.:
Zfish   216 KSDPIEKSKVVVQFPSAERFKPSYVHSFGMTENYFVFVETPVKINLLKFLSAWSIRGSNYMDCFE 280

  Fly   306 WFEDRPTLFHLIDRVSGKLVQ-TYESEAFFYLHIINCFERDGHVVVDICSYRNPEMI-NCMYLEA 368
            ..|::.|..|:..:..|:.:. .:.:.|....|.|||:|..|.:|.|:|:::..|.: |.::|  
Zfish   281 SDEEKGTWIHIARKHPGEYIDYKFRTSAMGLFHHINCYEDSGFIVFDLCAWKGFEFVYNYLWL-- 343

  Fly   369 IANMQTNPNYATLFRGRPL-------RFVLPLGTIPPASIAKRGLVKSFSLAGLSAPQVSRTMKH 426
             ||::.  |:..:.|...:       |:|:||..                               
Zfish   344 -ANLRA--NWEEVKRNAMIAPQPEVRRYVIPLDP------------------------------- 374

  Fly   427 SVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEGSQAEAFQGTNG-IQLRPE 490
                                             :.||...||:::..:.|.|....:| |.|.||
Zfish   375 ---------------------------------FREEQGKNLISLPYTTATATMRADGTIWLEPE 406

  Fly   491 MLCD---WGCETPRIYYERYMGKNYRYFYAISSDVDAVNPGTLIKVDVWNKSCLTWCEENVYPSE 552
            :|..   ...|.|:|.|....||||.|.|.:.  ::...|..:.|::|..|....|.|.:.||||
Zfish   407 VLFSGPRQAFEFPQINYRMVNGKNYTYAYGLG--LNHFVPDRICKLNVRTKETWVWQEPDSYPSE 469

  Fly   553 PIFVPSPDPKSEDDGVILASMVLGGLNDRYVGLIVLCAKTMTELGRCDFHTNGPVPKCLHGWFAP 617
            |:||.:||...||||:::..:|..|. .|....::|.||.::|:.|.:.....||  ..||.:.|
Zfish   470 PLFVQTPDGVDEDDGILMTIVVSPGA-QRPTYCLILNAKDLSEIARAEVEILTPV--TFHGMYKP 531

  Fly   618  617
            Zfish   532  531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaBNP_650307.2 RPE65 52..617 CDD:281102 178/583 (31%)
rpe65aNP_957045.1 RPE65 21..531 CDD:376981 178/583 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581443
Domainoid 1 1.000 353 1.000 Domainoid score I958
eggNOG 1 0.900 - - E1_COG3670
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 357 1.000 Inparanoid score I2188
OMA 1 1.010 - - QHG59724
OrthoDB 1 1.010 - - D342267at33208
OrthoFinder 1 1.000 - - FOG0000856
OrthoInspector 1 1.000 - - otm24986
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10543
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X319
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.870

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