DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaB and bcmo-1

DIOPT Version :9

Sequence 1:NP_650307.2 Gene:ninaB / 41678 FlyBaseID:FBgn0002937 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_496729.2 Gene:bcmo-1 / 189959 WormBaseID:WBGene00012914 Length:529 Species:Caenorhabditis elegans


Alignment Length:603 Identity:161/603 - (26%)
Similarity:270/603 - (44%) Gaps:95/603 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DGNGRLYPNCSSDVWLRSCEREIVDPIEGHHSGHIPKWICGSLLRNGPGSWKVGDMTFGHLFDCS 95
            :|..||:.|..:          :.:|.|....|.:|.::.|::||||||.:.||:..:.|.||..
 Worm     4 EGFPRLFHNFEN----------VPEPKECKKVGSVPSYLTGTMLRNGPGMFTVGEEEYKHWFDGL 58

  Fly    96 ALLHRFAIRNGRVTYQNRFVDTETLRKNRSAQRIVVTEFGTAAVPDPCHSIFDRFAAIFRPDSGT 160
            ..:.|:...:|::.|..|::::|...|...|||||...|||.:.||||.:||.::.:.|...|..
 Worm    59 GFMQRYHFEDGKMFYSARYLESEAYTKTVEAQRIVAGTFGTLSFPDPCKTIFSKYFSEFMNHSEK 123

  Fly   161 -DNSMISIYPFGDQYYTFTETPFMHRINPCTLATEARICTTDFVGVVNHTSHPHVLPSGTVYNLG 224
             |||.::..|.||..|..||||.|:|::..||.|......:.||.|.:.|:|.....:|.|||:|
 Worm   124 HDNSNVAFTPVGDSLYACTETPHMYRVDLDTLKTLEAADFSKFVAVHSCTAHQLYDENGDVYNIG 188

  Fly   225 TTMTRSGP----AYTILSFP-----HGEQMFEDAHVVATLPCRWKLHPGYMHTFGLTDHYFVIVE 280
               :|.||    .:|:...|     ..:..:|....:..:.....|:|.|||:||::::|.|:.|
 Worm   189 ---SRFGPESAHVFTVTKNPKNQKSENDHSWEHTSKIGEIKASDPLYPTYMHSFGMSENYLVMFE 250

  Fly   281 QPLSVSLTEYIKAQLGGQNLSACLKWFEDRPTLFHLIDRVSG-KLVQTYESEAFFYLHIINCFER 344
            .|:.:.|.:|:.::........||:|..|:.....::::.:| :|..|.:...||..|..|.||:
 Worm   251 SPVRLHLQKYLLSEFVRATYHDCLEWHGDKDVSIFILNKKTGEQLPLTLKMNPFFTFHHANTFEK 315

  Fly   345 DGHVVVDICSYRNPEMINCMYLEAIANMQTNP-NYATLFRGRPLRFVLPLGTIPPASIAKRGLVK 408
            ||.:|:|.|...|....:.:   .|:||:|.. .|...|.....|.::|:..   :|.||.|   
 Worm   316 DGCLVMDYCRIENAGKFDTL---LISNMKTGEFQYDAKFLPYLTRVIVPMSV---SSSAKPG--- 371

  Fly   409 SFSLAGLSAPQVSRTMKHSVSQYADITYMPTNGKQATAGEESPKRDAKRGRYEEENLVNLVTMEG 473
                                                                  :||:..|....
 Worm   372 ------------------------------------------------------DNLLKSVPWAS 382

  Fly   474 SQAEAFQGTNGIQLRPEMLCDWGCETPRIYYERYMGKNYRYFY--AISSDVDAVNPGTLIKVDVW 536
            ......|....|:|....:|:...|.||.::|:...|.|||.:  .:...:|. |...::|.|:.
 Worm   383 GCTSILQDDGSIRLTERRVCETSMEFPRYHWEKINMKEYRYVFGSTVFGRIDG-NLAGVVKADLK 446

  Fly   537 NKSCLTWCEENVYP--SEPIFVPSPDPKSEDDGVILASMVLGGLNDRYVGLIVLCAKTMTELGRC 599
            ..:.|.|..||.:.  .||||||:|:...||||:::.. ::.....:...:::|.|||:.|..|.
 Worm   447 FGNHLIWNRENPHQICGEPIFVPNPEGIEEDDGILIVP-IMSSSEKQVPFVLILDAKTLEETARF 510

  Fly   600 DFHTNGPVPKCLHGWFAP 617
            :. ....:|...|.::.|
 Worm   511 EI-PEARIPLGFHAFYKP 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaBNP_650307.2 RPE65 52..617 CDD:281102 156/580 (27%)
bcmo-1NP_496729.2 RPE65 16..527 CDD:281102 156/579 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159627
Domainoid 1 1.000 262 1.000 Domainoid score I1038
eggNOG 1 0.900 - - E1_COG3670
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 263 1.000 Inparanoid score I1888
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59724
OrthoDB 1 1.010 - - D342267at33208
OrthoFinder 1 1.000 - - FOG0000856
OrthoInspector 1 1.000 - - otm14590
orthoMCL 1 0.900 - - OOG6_100941
Panther 1 1.100 - - LDO PTHR10543
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X319
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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