DRSC/TRiP Functional Genomics Resources

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Protein Alignment f-cup and CYR1

DIOPT Version :10

Sequence 1:NP_001262544.1 Gene:f-cup / 41677 FlyBaseID:FBgn0028487 Length:802 Species:Drosophila melanogaster
Sequence 2:NP_012529.3 Gene:CYR1 / 853452 SGDID:S000003542 Length:2026 Species:Saccharomyces cerevisiae


Alignment Length:764 Identity:159/764 - (20%)
Similarity:269/764 - (35%) Gaps:227/764 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 FRPIFHERSTHEDDQVLTQELWKLARKSGT-LNLSNKALARVPKRLY----DINEADADSKAVNL 141
            |.|:.....|.|.:|       ::.|.... ::|.|..|...|...|    :|...|..:.|...
Yeast   773 FHPVTPSHFTPEQEQ-------RIMRSEFVHVDLRNMDLTTPPIIFYQHTSEIESLDVSNNANIF 830

  Fly   142 EQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVR 206
            ..|...|     :.:.|.:|.:.:...:.....|.....|..|.|..|.:.::|..|.||..|..
Yeast   831 LPLEFIE-----SSIKLLSLRMVNIRASKFPSNITKAYKLVSLELQRNFIRKVPNSIMKLSNLTI 890

  Fly   207 LNVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLV 271
            ||:..|:|..||.....|..|:.|::|.|:|:.....|:....|..:|..:|.|||||....:||
Yeast   891 LNLQCNELESLPAGFVELKNLQLLDLSSNKFMHYPEVINYCTNLLQIDLSYNKIQSLPQSTKYLV 955

  Fly   272 RLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLR-----------------KL 319
            :|..:.|.:|.:..: .||..|..|:.::|.:|.::|:..:...|:                 ||
Yeast   956 KLAKMNLSHNKLNFI-GDLSEMTDLRTLNLRYNRISSIKTNASNLQNLFLTDNRISNFEDTLPKL 1019

  Fly   320 DCLYLQHNDILEL------PEFEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITEL 378
            ..|.:|.|.|..:      |:...:..||:...|:     ||..:.:.|..|:.|:|..|.:|.|
Yeast  1020 RALEIQENPITSISFKDFYPKNMTSLTLNKAQLSS-----IPGELLTKLSFLEKLELNQNNLTRL 1079

  Fly   379 PDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDR 443
            |.|:..|..|..|.|:.|.:..:|..||.|..|.:|.:..|.|    ||.:.             
Yeast  1080 PQEISKLTKLVFLSVARNKLEYIPPELSQLKSLRTLDLHSNNI----RDFVD------------- 1127

  Fly   444 AVAKAKEEGGGVDDAS-TSAGISVTRLRGGQMDDGDIPGNFPDSFHHQQQQNGFQCPCSYPCQQQ 507
                      |:::.. ||..||                  .::|.:...:|.|....||..:..
Yeast  1128 ----------GMENLELTSLNIS------------------SNAFGNSSLENSFYHNMSYGSKLS 1164

  Fly   508 QMQQQFCVYE--------PLRNCQEYDRQTQGRIYEPENYQQQHQNGSLRSLFVQQQQQRMEYPY 564
            :....|...:        ||.||                                          
Yeast  1165 KSLMFFIAADNQFDDAMWPLFNC------------------------------------------ 1187

  Fly   565 PGYFMYQQQQQQQFSYEQDPSSRSAVHPRWVYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHV 629
                                                    .|||:                   |
Yeast  1188 ----------------------------------------FVNLK-------------------V 1193

  Fly   630 VDFARNQLSTLPNGLQHMK-DLVTELVLSNNVIGYVP-QFISQFTRISFLNLSNNLLNDLPTEFG 692
            ::.:.|..|    .:.||| :.:|||.||.|.:..:. ..:.:::.:..|.|::|.:..||.|..
Yeast  1194 LNLSYNNFS----DVSHMKLESITELYLSGNKLTTLSGDTVLKWSSLKTLMLNSNQMLSLPAELS 1254

  Fly   693 VLNTLRELNIANNRFPC-IPNCVYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIET 756
            .|:.|...::..|:... |.|..|:...     .:...:|.||.||   .||.......::||:.
Yeast  1255 NLSQLSVFDVGANQLKYNISNYHYDWNW-----RNNKELKYLNFSG---NRRFEIKSFISHDIDA 1311

  Fly   757 VPPILGNLTNITHLELVG------NPFRQPRHQI--LMKGTDAIMSYLR 797
               .|.:||.:..|:::|      |..:.|...:  .::.|.:|::.:|
Yeast  1312 ---DLSDLTVLPQLKVLGLMDVTLNTTKVPDENVNFRLRTTASIINGMR 1357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
f-cupNP_001262544.1 LRR 98..428 CDD:443914 92/357 (26%)
leucine-rich repeat 111..140 CDD:275380 8/33 (24%)
leucine-rich repeat 158..180 CDD:275380 3/21 (14%)
leucine-rich repeat 181..203 CDD:275380 8/21 (38%)
leucine-rich repeat 204..226 CDD:275380 8/21 (38%)
leucine-rich repeat 227..249 CDD:275380 6/21 (29%)
leucine-rich repeat 250..272 CDD:275380 9/21 (43%)
leucine-rich repeat 273..295 CDD:275380 6/21 (29%)
leucine-rich repeat 296..318 CDD:275380 5/38 (13%)
leucine-rich repeat 319..340 CDD:275380 6/26 (23%)
leucine-rich repeat 341..364 CDD:275380 6/22 (27%)
leucine-rich repeat 389..410 CDD:275380 7/20 (35%)
leucine-rich repeat 411..430 CDD:275380 6/18 (33%)
leucine-rich repeat 627..650 CDD:275380 6/23 (26%)
LRR <629..>778 CDD:443914 39/157 (25%)
leucine-rich repeat 651..669 CDD:275380 6/18 (33%)
leucine-rich repeat 697..719 CDD:275380 5/22 (23%)
leucine-rich repeat 720..743 CDD:275380 5/22 (23%)
leucine-rich repeat 744..766 CDD:275380 4/21 (19%)
CYR1NP_012529.3 MSCRAMM_ClfA 188..>366 CDD:468110
Ad_cyc_g-alpha 368..418 CDD:430040
RA_PHLPP_like 678..776 CDD:340473 1/2 (50%)
leucine-rich repeat 796..817 CDD:275380 5/20 (25%)
LRR 818..1252 CDD:443914 122/594 (21%)
leucine-rich repeat 818..839 CDD:275380 5/25 (20%)
leucine-rich repeat 840..864 CDD:275380 3/23 (13%)
leucine-rich repeat 865..887 CDD:275380 8/21 (38%)
leucine-rich repeat 888..910 CDD:275380 8/21 (38%)
leucine-rich repeat 911..933 CDD:275380 6/21 (29%)
leucine-rich repeat 934..956 CDD:275380 9/21 (43%)
leucine-rich repeat 957..978 CDD:275380 6/21 (29%)
leucine-rich repeat 979..1018 CDD:275380 5/38 (13%)
leucine-rich repeat 1019..1041 CDD:275380 6/21 (29%)
leucine-rich repeat 1042..1065 CDD:275380 6/27 (22%)
leucine-rich repeat 1066..1088 CDD:275380 9/21 (43%)
leucine-rich repeat 1089..1111 CDD:275380 8/21 (38%)
leucine-rich repeat 1167..1187 CDD:275380 3/19 (16%)
leucine-rich repeat 1191..1211 CDD:275380 7/42 (17%)
leucine-rich repeat 1236..1258 CDD:275380 7/21 (33%)
leucine-rich repeat 1259..1287 CDD:275380 5/32 (16%)
PP2C 1374..1617 CDD:395385
CYCc 1613..1825 CDD:214485
Blue background indicates that the domain is not in the aligned region.

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